RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 ZNF835Q9Y2P0 537 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 COL18A1P39060 1754 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 ANKUB1A6NFN9 424 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 CTAG2O75638 210 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 PCBP3P57721 371 aaKnown RBP6.98□□□□□ -1.29
NEDD9-204ENST00000448183 RPS16P62249 146 aaKnown RBP6.98□□□□□ -1.29
NEDD9-204ENST00000448183 RAE1P78406 368 aaKnown RBP6.98□□□□□ -1.29
NEDD9-204ENST00000448183 RAB32Q13637 225 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 DMRTC1Q5HYR2 192 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 GALMQ96C23 342 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 GPR137Q96N19 417 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 ABHD1Q96SE0 405 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 GNB4Q9HAV0 340 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 TMEM272A0A1B0GTI8 110 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 C9orf170A2RU37 121 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 GPR37O15354 613 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 MBTPS2O43462 519 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 PRSS23O95084 383 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 DUS4LO95620 317 aaKnown RBP6.98□□□□□ -1.29
NEDD9-204ENST00000448183 ABCD3P28288 659 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 ZNF718Q3SXZ3 478 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 PRSS54Q6PEW0 395 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 KMT5CQ86Y97 462 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 HLA-CQ95604 372 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 IL21Q9HBE4 155 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 LYRM2Q9NU23 88 aaPredicted RBP6.98□□□□□ -1.29
NEDD9-204ENST00000448183 C20orf141Q9NUB4 165 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 UQCC1Q9NVA1 299 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 KIAA1456Q9P272 454 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 CACNA1SQ13698 1873 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 IGLV3-16A0A075B6K0 115 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 LOC102723971A0A1B0GUV8 181 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 PLRG1O43660 514 aaKnown RBP6.98□□□□□ -1.29
NEDD9-204ENST00000448183 COX7A2P2O60397 106 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 GPANK1O95872 356 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 GNB1P62873 340 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 ADPRHL1Q8NDY3 354 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 PIK3IP1Q96FE7 263 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 TIMD4Q96H15 378 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 ARHGAP5-AS1Q96IT6 56 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 RAB40CQ96S21 281 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 UBE2ZQ9H832 354 aaPredicted RBP6.98□□□□□ -1.29
NEDD9-204ENST00000448183 KNTC1P50748 2209 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 STRCQ7RTU9 1775 aa6.98□□□□□ -1.29
NEDD9-204ENST00000448183 EVPLQ92817 2033 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.97□□□□□ -1.29
NEDD9-204ENST00000448183 IGHV3-15A0A0B4J1V0 119 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 CBR3O75828 277 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 PIAS2O75928 621 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 ZGLP1P0C6A0 271 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 FAM157BP0CG42 384 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 PMCHP20382 165 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 G0S2P27469 103 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 GFERP55789 205 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 TMEM241Q24JQ0 296 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 CEACAM16Q2WEN9 425 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 SMIM21Q3B7S5 101 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 GGNBP1Q5YKI7 109 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 LSMEM1Q8N8F7 131 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 OR4C5Q8NGB2 326 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 APOBEC3DQ96AK3 386 aaPredicted RBP6.97□□□□□ -1.29
NEDD9-204ENST00000448183 NOL4LQ96MY1 436 aaPredicted RBP6.97□□□□□ -1.29
NEDD9-204ENST00000448183 IP6K3Q96PC2 410 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 ADAMTS7Q9UKP4 1686 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 KCNE1BA0A087WTH5 132 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 ANKRD20A5PA0PJZ0 165 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 SERTM1A2A2V5 107 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 HPP00738 406 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 CDAP32320 146 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 MEOX2P50222 304 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 ZNF816Q0VGE8 651 aaPredicted RBP6.97□□□□□ -1.29
NEDD9-204ENST00000448183 KISS1Q15726 138 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 FAM219BQ5XKK7 198 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 NHLRC1Q6VVB1 395 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 C17orf47Q8NEP4 570 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 SARAFQ96BY9 339 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 FAM210BQ96KR6 192 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 MRGPRX1Q96LB2 322 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 NXF2Q9GZY0 626 aaKnown RBP6.97□□□□□ -1.29
NEDD9-204ENST00000448183 DEFB127Q9H1M4 99 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 PLAC1Q9HBJ0 212 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 POMT1Q9Y6A1 747 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 TTC3P53804 2025 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 EPPINO95925 133 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 ONECUT2O95948 504 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 KRASP01116 189 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 USF1P22415 310 aaPredicted RBP6.97□□□□□ -1.29
NEDD9-204ENST00000448183 HIST1H3AP68431 136 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 PRDX4Q13162 271 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 ZNF793Q6ZN11 406 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 OR5C1Q8NGR4 320 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 OR1F12Q8NHA8 337 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 HMGCLL1Q8TB92 370 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 FOXB1Q99853 325 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 BTAF1O14981 1849 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 AKAP11Q9UKA4 1901 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 SCN7AQ01118 1682 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 MAP1LC3B2A6NCE7 125 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 LY86O95711 162 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 PAX5Q02548 391 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms