RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 TRBV23-1A0A0A0MS06 115 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 A0A0U1RQV5 110 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 CDIPTO14735 213 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 MELTFP08582 738 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 MMP9P14780 707 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 TGFBR2P37173 567 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 RPS27P42677 84 aaKnown RBP6.43□□□□□ -1.38
CD44-211ENST00000442151 RIDAP52758 137 aaKnown RBP6.43□□□□□ -1.38
CD44-211ENST00000442151 CAV3P56539 151 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 PSMA6P60900 246 aaKnown RBP6.43□□□□□ -1.38
CD44-211ENST00000442151 CDK5Q00535 292 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 PRDX4Q13162 271 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 SNAPC1Q16533 368 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 GFOD2Q3B7J2 385 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 FAM76BQ5HYJ3 339 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 PLBD1Q6P4A8 553 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 WDR82Q6UXN9 313 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 BRD3OSQ6XYD6 125 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 SPATA24Q86W54 205 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 LDLRAD3Q86YD5 345 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 FAM90A1Q86YD7 464 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 OR5P3Q8WZ94 311 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 H1FXQ92522 213 aaKnown RBP6.43□□□□□ -1.38
CD44-211ENST00000442151 RAB3IPQ96QF0 476 aaPredicted RBP6.43□□□□□ -1.38
CD44-211ENST00000442151 TBX15Q96SF7 602 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 MYCBPQ99417 103 aaPredicted RBP6.43□□□□□ -1.38
CD44-211ENST00000442151 CCL13Q99616 98 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 NIPSNAP1Q9BPW8 284 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 DCTN5Q9BTE1 182 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 METTL8Q9H825 291 aaKnown RBP6.43□□□□□ -1.38
CD44-211ENST00000442151 MOB1AQ9H8S9 216 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 SLC25A19Q9HC21 320 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 BRD7Q9NPI1 651 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 ENPP5Q9UJA9 477 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 ANK2Q01484 3957 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 ARHGAP32A7KAX9 2087 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 TMEM269A0A1B0GVZ9 245 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 A0A1W2PQ09 198 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 ZNF850A8MQ14 1090 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 CLUP10909 449 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 GLRA1P23415 457 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 ESRRGP62508 458 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 FLOT2Q14254 428 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 CEACAM21Q3KPI0 293 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 WDR38Q5JTN6 314 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 ZNF684Q5T5D7 378 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 ZNF826PQ6ZT77 177 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 KRT74Q7RTS7 529 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 PRSS45Q7RTY3 260 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 VMO1Q7Z5L0 202 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 COMMD2Q86X83 199 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 ZNF573Q86YE8 665 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 CPOQ8IVL8 374 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 C11orf53Q8IXP5 236 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 C19orf18Q8NEA5 215 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 C8orf46Q8TAG6 207 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 ZNRF4Q8WWF5 429 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 C1orf147Q96MC9 270 aaPredicted RBP6.42□□□□□ -1.38
CD44-211ENST00000442151 RASSF4Q9H2L5 321 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 HEXA-AS1Q9H8Q6 139 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 TAS2R1Q9NYW7 299 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 C1RLQ9NZP8 487 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 DNAJC27Q9NZQ0 273 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 NLKQ9UBE8 527 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 CTSZQ9UBR2 303 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 SLC25A10Q9UBX3 287 aaPredicted RBP6.42□□□□□ -1.38
CD44-211ENST00000442151 POLDIP2Q9Y2S7 368 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 RHBDD3Q9Y3P4 386 aa6.42□□□□□ -1.38
CD44-211ENST00000442151 IGHV3OR15-7A0A075B7D8 119 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 FAM183AA6NL82 134 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 ZNF732B4DXR9 585 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 ATP5HO75947 161 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 RPSAP08865 295 aaKnown RBP6.41□□□□□ -1.38
CD44-211ENST00000442151 ACAA1P09110 424 aaPredicted RBP6.41□□□□□ -1.38
CD44-211ENST00000442151 ALOX5APP20292 161 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 MDKP21741 143 aaPredicted RBP6.41□□□□□ -1.38
CD44-211ENST00000442151 IER3P46695 156 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 GABRA2P47869 451 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 UBE2E1P51965 193 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 CRISP1P54107 249 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 CBX1P83916 185 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 MS4A2Q01362 244 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 PPP1R8Q12972 351 aaKnown RBP6.41□□□□□ -1.38
CD44-211ENST00000442151 STUMQ69YW2 141 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 DHRS7BQ6IAN0 325 aaPredicted RBP6.41□□□□□ -1.38
CD44-211ENST00000442151 MOB3CQ70IA8 216 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 CALHM1Q8IU99 346 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 ZNF679Q8IYX0 411 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 ADGRG5Q8IZF4 528 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 CANT1Q8WVQ1 401 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 UBE2FQ969M7 185 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 TEAD3Q99594 435 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 PKP2Q99959 881 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 ADI1Q9BV57 179 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 C16orf95Q9H693 158 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 PAPOLBQ9NRJ5 636 aaKnown RBP6.41□□□□□ -1.38
CD44-211ENST00000442151 TNFRSF19Q9NS68 423 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 SLC7A11Q9UPY5 501 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 ANKRD61A6NGH8 418 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 SLC22A31A6NKX4 558 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms