RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 WNT5BQ9H1J7 359 aa9.11□□□□□ -0.95
CPNE1-218ENST00000439806 SLC6A15Q9H2J7 730 aa9.11□□□□□ -0.95
CPNE1-218ENST00000439806 ZNF391Q9UJN7 358 aa9.11□□□□□ -0.95
CPNE1-218ENST00000439806 MCTS1Q9ULC4 181 aaKnown RBP9.11□□□□□ -0.95
CPNE1-218ENST00000439806 UNC80Q8N2C7 3258 aa9.11□□□□□ -0.95
CPNE1-218ENST00000439806 A0A1W2PNU3 283 aaPredicted RBP9.1□□□□□ -0.95
CPNE1-218ENST00000439806 FAM230AA0A1W2PPH8 454 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 SERPINE3A8MV23 424 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 FAM25EA8MYX2 175 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 LEUTXA8MZ59 168 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 CCSO14618 274 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 TERTO14746 1132 aaKnown RBP9.1□□□□□ -0.95
CPNE1-218ENST00000439806 XRCC2O43543 280 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 CA11O75493 328 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 NEURL1O76050 574 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 CFDP00746 253 aaPredicted RBP9.1□□□□□ -0.95
CPNE1-218ENST00000439806 CSTBP04080 98 aaKnown RBP9.1□□□□□ -0.95
CPNE1-218ENST00000439806 SERPINA5P05154 406 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 PATE4P0C8F1 98 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 RPA2P15927 270 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 AKR1C4P17516 323 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 GABRR1P24046 479 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 NTF4P34130 210 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 RFC3P40938 356 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 HGFACQ04756 655 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 SRSF4Q08170 494 aaKnown RBP9.1□□□□□ -0.95
CPNE1-218ENST00000439806 RSU1Q15404 277 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 RSPO4Q2I0M5 234 aaPredicted RBP9.1□□□□□ -0.95
CPNE1-218ENST00000439806 LY6G6FQ5SQ64 297 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 CRIP3Q6Q6R5 217 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 PLXDC2Q6UX71 529 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 LINC00696Q6ZRV3 163 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 MOB3CQ70IA8 216 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 C1QL2Q7Z5L3 287 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 SULF2Q8IWU5 870 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 SKA3Q8IX90 412 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 ADAMTS17Q8TE56 1095 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 ST8SIA4Q92187 359 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 FBXW5Q969U6 566 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 BORCS8Q96FH0 119 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 ST6GALNAC5Q9BVH7 336 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 HES7Q9BYE0 225 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 TTTY12Q9BZ98 90 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 MFFQ9GZY8 342 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 RGCCQ9H4X1 137 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 PARPBPQ9NWS1 579 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 PLA2G3Q9NZ20 509 aa9.1□□□□□ -0.95
CPNE1-218ENST00000439806 KLF13Q9Y2Y9 288 aaPredicted RBP9.1□□□□□ -0.95
CPNE1-218ENST00000439806 IGKV3D-15A0A087WSY6 115 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 TRAV14DV4A0A0A6YYC5 116 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 A0A0D9SG52 128 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 RPS10-NUDT3A0A1W2PQS6 291 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 OR2AT4A6NND4 320 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 FOXI3A8MTJ6 420 aaPredicted RBP9.09□□□□□ -0.95
CPNE1-218ENST00000439806 ZNF587BE7ETH6 402 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 EFSO43281 561 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 NRASP01111 189 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 CD8AP01732 235 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 CELA3AP09093 270 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 ZNF806P0C7X5 589 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 FPR2P25090 351 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 ACKR3P25106 362 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 MAGEA5P43359 124 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 MEOX1P50221 254 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 LHX2P50458 406 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 ATP1B3P54709 279 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 SNU13P55769 128 aaKnown RBP9.09□□□□□ -0.95
CPNE1-218ENST00000439806 CLDN18P56856 261 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 STK11Q15831 433 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 KRTAP27-1Q3LI81 207 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 CHRFAM7AQ494W8 412 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 PABPC1L2AQ5JQF8 200 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 NKAPLQ5M9Q1 402 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 TSPO2Q5TGU0 170 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 MYO7BQ6PIF6 2116 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 GSG1LQ6UXU4 331 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 RFPL4BQ6ZWI9 263 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 KCTD9Q7L273 389 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 GALNTL5Q7Z4T8 443 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 DTX1Q86Y01 620 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 MCEMP1Q8IX19 187 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 ZNF100Q8IYN0 542 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 IL22RA1Q8N6P7 574 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 ADAD2Q8NCV1 583 aaKnown RBP9.09□□□□□ -0.95
CPNE1-218ENST00000439806 TERB2Q8NHR7 220 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 FGFBP3Q8TAT2 258 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 MITD1Q8WV92 249 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 PCNPQ8WW12 178 aaKnown RBP9.09□□□□□ -0.95
CPNE1-218ENST00000439806 MRGPRFQ96AM1 343 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 GSX2Q9BZM3 304 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 PPA2Q9H2U2 334 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 CALHM2Q9HA72 323 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 ZNF701Q9NV72 531 aaPredicted RBP9.09□□□□□ -0.95
CPNE1-218ENST00000439806 PLEKHJ1Q9NW61 149 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 EHFQ9NZC4 300 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 KIF25Q9UIL4 384 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 SLC7A11Q9UPY5 501 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 AUP1Q9Y679 476 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 XIRP2A4UGR9 3374 aa9.09□□□□□ -0.95
CPNE1-218ENST00000439806 ARHGAP21Q5T5U3 1957 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms