RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 ZNF160Q9HCG1 818 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 G6PC2Q9NQR9 355 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 SDHAF3Q9NRP4 125 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 CACFD1Q9UGQ2 172 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 CYB5BO43169 146 aa8.02□□□□□ -1.13
COPB1-202ENST00000439561 PHF1O43189 567 aaPredicted RBP8.02□□□□□ -1.13
COPB1-202ENST00000439561 ANGPTL7O43827 346 aa8.02□□□□□ -1.13
COPB1-202ENST00000439561 GSTP1P09211 210 aaKnown RBP8.02□□□□□ -1.13
COPB1-202ENST00000439561 ZNF41P51814 821 aaPredicted RBP8.02□□□□□ -1.13
COPB1-202ENST00000439561 RRADP55042 308 aa8.02□□□□□ -1.13
COPB1-202ENST00000439561 SLC37A1P57057 533 aa8.02□□□□□ -1.13
COPB1-202ENST00000439561 RSPO4Q2I0M5 234 aaPredicted RBP8.02□□□□□ -1.13
COPB1-202ENST00000439561 PLAC9Q5JTB6 97 aa8.02□□□□□ -1.13
COPB1-202ENST00000439561 OR2G3Q8NGZ4 309 aa8.02□□□□□ -1.13
COPB1-202ENST00000439561 MRGPRFQ96AM1 343 aa8.02□□□□□ -1.13
COPB1-202ENST00000439561 MEGF10Q96KG7 1140 aa8.02□□□□□ -1.13
COPB1-202ENST00000439561 MRGPRX1Q96LB2 322 aa8.02□□□□□ -1.13
COPB1-202ENST00000439561 AQP10Q96PS8 301 aa8.02□□□□□ -1.13
COPB1-202ENST00000439561 SUCNR1Q9BXA5 334 aa8.02□□□□□ -1.13
COPB1-202ENST00000439561 SH3BGRL3Q9H299 93 aa8.02□□□□□ -1.13
COPB1-202ENST00000439561 CUTCQ9NTM9 273 aa8.02□□□□□ -1.13
COPB1-202ENST00000439561 ZNF107Q9UII5 783 aaPredicted RBP8.02□□□□□ -1.13
COPB1-202ENST00000439561 SLC7A11Q9UPY5 501 aa8.02□□□□□ -1.13
COPB1-202ENST00000439561 TMEM184BQ9Y519 407 aaPredicted RBP8.02□□□□□ -1.13
COPB1-202ENST00000439561 ZNF705GA8MUZ8 300 aaPredicted RBP8.02□□□□□ -1.13
COPB1-202ENST00000439561 RAD51DO75771 328 aa8.02□□□□□ -1.13
COPB1-202ENST00000439561 FAHP16930 419 aa8.02□□□□□ -1.13
COPB1-202ENST00000439561 IGFBP3P17936 291 aaPredicted RBP8.02□□□□□ -1.13
COPB1-202ENST00000439561 CSRP1P21291 193 aaKnown RBP8.02□□□□□ -1.13
COPB1-202ENST00000439561 FAM189A2Q15884 450 aa8.02□□□□□ -1.13
COPB1-202ENST00000439561 TMEM230Q96A57 120 aa8.02□□□□□ -1.13
COPB1-202ENST00000439561 GGACTQ9BVM4 153 aa8.02□□□□□ -1.13
COPB1-202ENST00000439561 METTL7AQ9H8H3 244 aa8.02□□□□□ -1.13
COPB1-202ENST00000439561 PARP11Q9NR21 331 aa8.02□□□□□ -1.13
COPB1-202ENST00000439561 TMEM100Q9NV29 134 aa8.02□□□□□ -1.13
COPB1-202ENST00000439561 DNAJB11Q9UBS4 358 aa8.02□□□□□ -1.13
COPB1-202ENST00000439561 ZNF217O75362 1048 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 QDPRP09417 244 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 H2AFB1P0C5Y9 115 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 OR5H8P0DN80 308 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 FABP4P15090 132 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 ZNF708P17019 499 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 PPP1CCP36873 323 aaKnown RBP8.01□□□□□ -1.13
COPB1-202ENST00000439561 GABREP78334 506 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 SLC35A1P78382 337 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 TLE1Q04724 770 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 DEFB133Q30KQ1 61 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 FDX2Q6P4F2 183 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 UBAC2Q8NBM4 344 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 PTPMT1Q8WUK0 201 aaPredicted RBP8.01□□□□□ -1.13
COPB1-202ENST00000439561 KLHDC7BQ96G42 594 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 SMIM8Q96KF7 97 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 WWTR1Q9GZV5 400 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 SLC35B3Q9H1N7 401 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 UFSP2Q9NUQ7 469 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 UBE2J1Q9Y385 318 aaPredicted RBP8.01□□□□□ -1.13
COPB1-202ENST00000439561 ADAM10O14672 748 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 RNF224P0DH78 156 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 ZNF728P0DKX0 622 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 ZNF43P17038 809 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 FBLP22087 321 aaKnown RBP8.01□□□□□ -1.13
COPB1-202ENST00000439561 GNRHRP30968 328 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 DCDP81605 110 aaKnown RBP8.01□□□□□ -1.13
COPB1-202ENST00000439561 NHLH2Q02577 135 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 CLEC12BQ2HXU8 276 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 FAM69BQ5VUD6 431 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 ZNF343Q6P1L6 599 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 TMEM123Q8N131 208 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 TCTN2Q96GX1 697 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 RBM24Q9BX46 236 aaKnown RBP8.01□□□□□ -1.13
COPB1-202ENST00000439561 PPP4R1LQ9P1A2 415 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 NUP210Q8TEM1 1887 aaPredicted RBP8.01□□□□□ -1.13
COPB1-202ENST00000439561 ASXL3Q9C0F0 2248 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 WIPF3A6NGB9 483 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 ZNF724A8MTY0 619 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 ONECUT2O95948 504 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 HLA-GP17693 338 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 KLK2P20151 261 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 MDKP21741 143 aaPredicted RBP8.01□□□□□ -1.13
COPB1-202ENST00000439561 PTGER4P35408 488 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 BLKP51451 505 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 MTCP1P56278 107 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 PCK2Q16822 640 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 PNLIPRP3Q17RR3 467 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.01□□□□□ -1.13
COPB1-202ENST00000439561 OR8B12Q8NGG6 310 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 RTN4IP1Q8WWV3 396 aaPredicted RBP8.01□□□□□ -1.13
COPB1-202ENST00000439561 HAS2Q92819 552 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 DDIT4LQ96D03 193 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 SSX3Q99909 188 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 RARRES2Q99969 163 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 CRLF2Q9HC73 371 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 AK3Q9UIJ7 227 aa8.01□□□□□ -1.13
COPB1-202ENST00000439561 FRG2CA6NGY1 282 aa8□□□□□ -1.13
COPB1-202ENST00000439561 TSTD3H0UI37 97 aa8□□□□□ -1.13
COPB1-202ENST00000439561 UBE2CO00762 179 aa8□□□□□ -1.13
COPB1-202ENST00000439561 HSPA12AO43301 675 aa8□□□□□ -1.13
COPB1-202ENST00000439561 CST7O76096 145 aa8□□□□□ -1.13
COPB1-202ENST00000439561 HEXAP06865 529 aa8□□□□□ -1.13
COPB1-202ENST00000439561 OR5AC1P0C628 307 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms