RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 RSC1A1Q92681 617 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 SCNM1Q9BWG6 230 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 G6PC2Q9NQR9 355 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 FBXL17Q9UF56 701 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 OR52A1Q9UKL2 312 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 FREM3P0C091 2139 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 IGLV1-36A0A0B4J1U3 117 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 IFITM10A6NMD0 228 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 CEACAM18A8MTB9 384 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 TGFBR3LH3BV60 316 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 NME2P1O60361 137 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 JTBO76095 146 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 GAPDHP04406 335 aaKnown RBP7.57□□□□□ -1.2
HPS4-206ENST00000439453 SFTPBP07988 381 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 RPL12P30050 165 aaKnown RBP7.57□□□□□ -1.2
HPS4-206ENST00000439453 OR1D5P58170 312 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 BTG2P78543 158 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 SKP2Q13309 424 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 KIAA0141Q14154 515 aaPredicted RBP7.57□□□□□ -1.2
HPS4-206ENST00000439453 CDPF1Q6NVV7 123 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 OR52N4Q8NGI2 321 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 OR52N5Q8NH56 324 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 METTL21AQ8WXB1 218 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 GTF3AQ92664 365 aaKnown RBP7.57□□□□□ -1.2
HPS4-206ENST00000439453 RTBDNQ9BSG5 229 aaPredicted RBP7.57□□□□□ -1.2
HPS4-206ENST00000439453 EIF5A2Q9GZV4 153 aaKnown RBP7.57□□□□□ -1.2
HPS4-206ENST00000439453 MEMO1Q9Y316 297 aa7.57□□□□□ -1.2
HPS4-206ENST00000439453 SDK2Q58EX2 2172 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 FER1L5A0AVI2 2057 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 P2RY10O00398 339 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 PRKNO60260 465 aaPredicted RBP7.56□□□□□ -1.2
HPS4-206ENST00000439453 SCGNO76038 276 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 ISG15P05161 165 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 ZNF708P17019 499 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 FPR2P25090 351 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 FCGR2CP31995 323 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 MAS1LP35410 378 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 CDX1P47902 265 aaPredicted RBP7.56□□□□□ -1.2
HPS4-206ENST00000439453 P2RY4P51582 365 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 FAM3AP98173 230 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 FOXC1Q12948 553 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 VAX1Q5SQQ9 334 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 FNDC7Q5VTL7 733 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 FAM180AQ6UWF9 173 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 ARRDC1Q8N5I2 433 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 SLAMF9Q96A28 289 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 FGGYQ96C11 551 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 SMIM3Q9BZL3 60 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 UCK1Q9HA47 277 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 IGHV1OR21-1A0A087WYE8 117 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 A0A1B0GV90 55 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 K7EPK0 472 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 CTLA4P16410 223 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 HSD11B1P28845 292 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 THBS4P35443 961 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 UCP2P55851 309 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 RAB1AP62820 205 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 ZFP36L1Q07352 338 aaKnown RBP7.56□□□□□ -1.2
HPS4-206ENST00000439453 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.56□□□□□ -1.2
HPS4-206ENST00000439453 OPN5Q6U736 354 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 FAM71E2Q8N5Q1 922 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 OR10H5Q8NGA6 315 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 OR9A4Q8NGU2 314 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 C16orf52Q8NHV5 167 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 CD300LFQ8TDQ1 290 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 ZDHHC12Q96GR4 267 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 SCGB3A2Q96PL1 93 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 KLHDC3Q9BQ90 382 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 CNTNAP3Q9BZ76 1288 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 CHST5Q9GZS9 411 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 FAM212BQ9NTI7 297 aaPredicted RBP7.56□□□□□ -1.2
HPS4-206ENST00000439453 ATXN7L1Q9ULK2 861 aaPredicted RBP7.56□□□□□ -1.2
HPS4-206ENST00000439453 LOC101059948A0A1B0GTJ6 334 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 BGLAPP02818 100 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 HPGDP15428 266 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 GNALP38405 381 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 RPL27P61353 136 aaKnown RBP7.56□□□□□ -1.2
HPS4-206ENST00000439453 BIKQ13323 160 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 ACKR1Q16570 336 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 ACTBL2Q562R1 376 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 HIST2H3AQ71DI3 136 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 PEG10Q86TG7 708 aaKnown RBP7.56□□□□□ -1.2
HPS4-206ENST00000439453 SLC22A24Q8N4F4 322 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 NAT6Q93015 286 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 MARS2Q96GW9 593 aaKnown RBP7.56□□□□□ -1.2
HPS4-206ENST00000439453 C14orf144Q96I85 54 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 RHOVQ96L33 236 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 NUDT22Q9BRQ3 303 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 NICN1Q9BSH3 213 aa7.56□□□□□ -1.2
HPS4-206ENST00000439453 SMG1Q96Q15 3661 aaKnown RBP7.55□□□□□ -1.2
HPS4-206ENST00000439453 KIR2DS5A0A0G2JLQ3 304 aa7.55□□□□□ -1.2
HPS4-206ENST00000439453 A0A0G2JNG1 304 aa7.55□□□□□ -1.2
HPS4-206ENST00000439453 KIR2DS3K7RE56 304 aa7.55□□□□□ -1.2
HPS4-206ENST00000439453 MPZL1O95297 269 aa7.55□□□□□ -1.2
HPS4-206ENST00000439453 EMP2P54851 167 aa7.55□□□□□ -1.2
HPS4-206ENST00000439453 NDUFA6P56556 154 aa7.55□□□□□ -1.2
HPS4-206ENST00000439453 TMEM33P57088 247 aa7.55□□□□□ -1.2
HPS4-206ENST00000439453 HHEXQ03014 270 aa7.55□□□□□ -1.2
HPS4-206ENST00000439453 ZNF616Q08AN1 781 aa7.55□□□□□ -1.2
HPS4-206ENST00000439453 KIR2DS5Q14953 304 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms