RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 CEBPGP53567 150 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 PRTGQ2VWP7 1150 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 EIF5AL1Q6IS14 154 aaKnown RBP11.95□□□□□ -0.5
PCNX3-202ENST00000439247 OR13H1Q8NG92 308 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 GNRHR2Q96P88 292 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 PCDH15Q96QU1 1955 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 ZDBF2Q9HCK1 2354 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 DIRAS3O95661 229 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 FOSL1P15407 271 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 RPS10P46783 165 aaKnown RBP11.95□□□□□ -0.5
PCNX3-202ENST00000439247 SLC26A5P58743 744 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 HHEXQ03014 270 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 POU3F1Q03052 451 aaPredicted RBP11.95□□□□□ -0.5
PCNX3-202ENST00000439247 ZNF343Q6P1L6 599 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 ABCA7Q8IZY2 2146 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 SLC22A18ASQ8N1D0 253 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 OR5D14Q8NGL3 314 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 C11orf40Q8WZ69 217 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 INTS12Q96CB8 462 aaKnown RBP11.95□□□□□ -0.5
PCNX3-202ENST00000439247 REEP6Q96HR9 211 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 TBL1XR1Q9BZK7 514 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 DNAJB11Q9UBS4 358 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 OSGIN2Q9Y236 505 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 MS4A18H0YCH9 400 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 RAMP1O60894 148 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 HCKP08631 526 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 IL12BP29460 328 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 CRABP1P29762 137 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 PPP1CCP36873 323 aaKnown RBP11.94□□□□□ -0.5
PCNX3-202ENST00000439247 GABRA4P48169 554 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 NDUFA6P56556 154 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 MS4A18Q3C1V0 323 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 VAX1Q5SQQ9 334 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 ARMC6Q6NXE6 501 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 PEG10Q86TG7 708 aaKnown RBP11.94□□□□□ -0.5
PCNX3-202ENST00000439247 TMEM151BQ8IW70 566 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 OR5AS1Q8N127 324 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 ZNF383Q8NA42 475 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 HSD17B11Q8NBQ5 300 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 TAAR9Q96RI9 348 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 GPER1Q99527 375 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 HDHD3Q9BSH5 251 aaPredicted RBP11.94□□□□□ -0.5
PCNX3-202ENST00000439247 TMEM59Q9BXS4 323 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 TOLLIPQ9H0E2 274 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 TMEM131Q92545 1883 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 SPAG17Q6Q759 2223 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 TTC28Q96AY4 2481 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 B4DGG1 531 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 CDAP32320 146 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 ACTBL2Q562R1 376 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 ABHD12BQ7Z5M8 362 aaPredicted RBP11.94□□□□□ -0.5
PCNX3-202ENST00000439247 LHFPL1Q86WI0 220 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 ARRDC1Q8N5I2 433 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 TMEM156Q8N614 296 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 TCEAL7Q9BRU2 100 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 URGCP-MRPS24S4R325 110 aa11.94□□□□□ -0.5
PCNX3-202ENST00000439247 H7C1Q1 480 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 NPIPB7O75200 414 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 NSA2O95478 260 aaKnown RBP11.93□□□□□ -0.5
PCNX3-202ENST00000439247 PRH1P02810 166 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 ZNF20P17024 532 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 TBPP20226 339 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 CAMLGP49069 296 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 RAB2AP61019 212 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 RPS23P62266 143 aaKnown RBP11.93□□□□□ -0.5
PCNX3-202ENST00000439247 KIAA0141Q14154 515 aaPredicted RBP11.93□□□□□ -0.5
PCNX3-202ENST00000439247 GFI1BQ5VTD9 330 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 UNQ6494/PRO21346Q6UXR6 183 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 PRRX2Q99811 253 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 TMPRSS5Q9H3S3 457 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 ZNF701Q9NV72 531 aaPredicted RBP11.93□□□□□ -0.5
PCNX3-202ENST00000439247 MRPS17Q9Y2R5 130 aaKnown RBP11.93□□□□□ -0.5
PCNX3-202ENST00000439247 GPR37O15354 613 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 PET100P0DJ07 73 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 TSPO2Q5TGU0 170 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 LYPD6BQ8NI32 183 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 RNF133Q8WVZ7 376 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 ADIPOR1Q96A54 375 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 SRPK3Q9UPE1 567 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 IGHV1OR15-9A0A0B4J2B8 117 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 A8MVM7 634 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 NPIPA5E9PKD4 350 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 DEDDO75618 318 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 MMP16P51512 607 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 GGNBP1Q5YKI7 109 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 OR51T1Q8NGJ9 327 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 DAZLQ92904 295 aaKnown RBP11.93□□□□□ -0.5
PCNX3-202ENST00000439247 SHDQ96IW2 340 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 NPIPA1Q9UND3 350 aa11.93□□□□□ -0.5
PCNX3-202ENST00000439247 A0A1B0GV90 55 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 CXorf65A6NEN9 183 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 PRSS47A8MTI9 375 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 E9PLN8 166 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 TAAR5O14804 337 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 GATCO43716 136 aaKnown RBP11.92□□□□□ -0.5
PCNX3-202ENST00000439247 JTBO76095 146 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 OR2C1O95371 312 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 AHSA1O95433 338 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 SERPINA2P20848 420 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 HNRNPA2B1P22626 353 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms