RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 Q96MT0 163 aa20.6■□□□□ 0.89
RAPGEF1-206ENST00000438647 KAAG1Q9UBP8 84 aa20.6■□□□□ 0.89
RAPGEF1-206ENST00000438647 CTSZQ9UBR2 303 aa20.6■□□□□ 0.89
RAPGEF1-206ENST00000438647 KIR2DS1A0A191URI9 304 aa20.59■□□□□ 0.89
RAPGEF1-206ENST00000438647 LOC100130705A0A1B0GUX0 176 aa20.59■□□□□ 0.89
RAPGEF1-206ENST00000438647 TNFRSF13BO14836 293 aaPredicted RBP20.59■□□□□ 0.89
RAPGEF1-206ENST00000438647 FSHBP01225 129 aa20.59■□□□□ 0.89
RAPGEF1-206ENST00000438647 PPIAL4GP0DN37 164 aa20.59■□□□□ 0.89
RAPGEF1-206ENST00000438647 MOB3CQ70IA8 216 aa20.59■□□□□ 0.89
RAPGEF1-206ENST00000438647 CATSPERDQ86XM0 798 aa20.59■□□□□ 0.89
RAPGEF1-206ENST00000438647 RORBQ92753 470 aa20.59■□□□□ 0.89
RAPGEF1-206ENST00000438647 RDH12Q96NR8 316 aa20.59■□□□□ 0.89
RAPGEF1-206ENST00000438647 MYCBPQ99417 103 aaPredicted RBP20.59■□□□□ 0.89
RAPGEF1-206ENST00000438647 NUDT16L1Q9BRJ7 211 aaKnown RBP20.59■□□□□ 0.89
RAPGEF1-206ENST00000438647 GNG8Q9UK08 70 aa20.59■□□□□ 0.89
RAPGEF1-206ENST00000438647 V9GYS6 101 aa20.59■□□□□ 0.89
RAPGEF1-206ENST00000438647 IGHV3OR15-7A0A075B7D8 119 aa20.58■□□□□ 0.89
RAPGEF1-206ENST00000438647 ZNF732B4DXR9 585 aa20.58■□□□□ 0.89
RAPGEF1-206ENST00000438647 P2RY10O00398 339 aa20.58■□□□□ 0.89
RAPGEF1-206ENST00000438647 TMPRSS2O15393 492 aa20.58■□□□□ 0.89
RAPGEF1-206ENST00000438647 ENSAO43768 121 aaKnown RBP20.58■□□□□ 0.89
RAPGEF1-206ENST00000438647 NRASP01111 189 aa20.58■□□□□ 0.89
RAPGEF1-206ENST00000438647 FPR2P25090 351 aa20.58■□□□□ 0.89
RAPGEF1-206ENST00000438647 C11orf91Q3C1V1 193 aa20.58■□□□□ 0.89
RAPGEF1-206ENST00000438647 KRTAP24-1Q3LI83 254 aa20.58■□□□□ 0.89
RAPGEF1-206ENST00000438647 CLVS2Q5SYC1 327 aa20.58■□□□□ 0.89
RAPGEF1-206ENST00000438647 USP43Q70EL4 1123 aa20.58■□□□□ 0.89
RAPGEF1-206ENST00000438647 SLC36A1Q7Z2H8 476 aa20.58■□□□□ 0.89
RAPGEF1-206ENST00000438647 KCTD20Q7Z5Y7 419 aa20.58■□□□□ 0.89
RAPGEF1-206ENST00000438647 ENTHD1Q8IYW4 607 aa20.58■□□□□ 0.89
RAPGEF1-206ENST00000438647 BPIFB2Q8N4F0 458 aa20.58■□□□□ 0.89
RAPGEF1-206ENST00000438647 CCDC54Q8NEL0 328 aa20.58■□□□□ 0.89
RAPGEF1-206ENST00000438647 OR14K1Q8NGZ2 314 aa20.58■□□□□ 0.89
RAPGEF1-206ENST00000438647 DACT3Q96B18 629 aaPredicted RBP20.58■□□□□ 0.89
RAPGEF1-206ENST00000438647 MRPL48Q96GC5 212 aaKnown RBP20.58■□□□□ 0.89
RAPGEF1-206ENST00000438647 SUCNR1Q9BXA5 334 aa20.58■□□□□ 0.89
RAPGEF1-206ENST00000438647 FGF23Q9GZV9 251 aaPredicted RBP20.58■□□□□ 0.89
RAPGEF1-206ENST00000438647 DNAJB11Q9UBS4 358 aa20.58■□□□□ 0.89
RAPGEF1-206ENST00000438647 SLC22A13Q9Y226 551 aa20.58■□□□□ 0.89
RAPGEF1-206ENST00000438647 A0A1B0GTI1 187 aa20.57■□□□□ 0.88
RAPGEF1-206ENST00000438647 A0A1B0GVI7 797 aa20.57■□□□□ 0.88
RAPGEF1-206ENST00000438647 DAPL1A0PJW8 107 aa20.57■□□□□ 0.88
RAPGEF1-206ENST00000438647 DLGAP1O14490 977 aa20.57■□□□□ 0.88
RAPGEF1-206ENST00000438647 CCL1P22362 96 aa20.57■□□□□ 0.88
RAPGEF1-206ENST00000438647 ZNF85Q03923 595 aa20.57■□□□□ 0.88
RAPGEF1-206ENST00000438647 Q6ZSR3 168 aa20.57■□□□□ 0.88
RAPGEF1-206ENST00000438647 PHC2Q8IXK0 858 aa20.57■□□□□ 0.88
RAPGEF1-206ENST00000438647 ACBD7Q8N6N7 88 aa20.57■□□□□ 0.88
RAPGEF1-206ENST00000438647 RHOXF1Q8NHV9 184 aa20.57■□□□□ 0.88
RAPGEF1-206ENST00000438647 JMJD8Q96S16 334 aa20.57■□□□□ 0.88
RAPGEF1-206ENST00000438647 ADI1Q9BV57 179 aa20.57■□□□□ 0.88
RAPGEF1-206ENST00000438647 OR51I2Q9H344 312 aa20.57■□□□□ 0.88
RAPGEF1-206ENST00000438647 PLEKHA1Q9HB21 404 aa20.57■□□□□ 0.88
RAPGEF1-206ENST00000438647 FAM118AQ9NWS6 357 aa20.57■□□□□ 0.88
RAPGEF1-206ENST00000438647 SMPD3Q9NY59 655 aaPredicted RBP20.57■□□□□ 0.88
RAPGEF1-206ENST00000438647 NUP50Q9UKX7 468 aa20.57■□□□□ 0.88
RAPGEF1-206ENST00000438647 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.56■□□□□ 0.88
RAPGEF1-206ENST00000438647 J3QRE1 110 aa20.56■□□□□ 0.88
RAPGEF1-206ENST00000438647 SLC16A6O15403 523 aa20.56■□□□□ 0.88
RAPGEF1-206ENST00000438647 SYT7O43581 403 aa20.56■□□□□ 0.88
RAPGEF1-206ENST00000438647 LIPFP07098 398 aa20.56■□□□□ 0.88
RAPGEF1-206ENST00000438647 GABRB1P18505 474 aa20.56■□□□□ 0.88
RAPGEF1-206ENST00000438647 ISL1P61371 349 aa20.56■□□□□ 0.88
RAPGEF1-206ENST00000438647 TP53I3Q53FA7 332 aa20.56■□□□□ 0.88
RAPGEF1-206ENST00000438647 TMEM42Q69YG0 159 aa20.56■□□□□ 0.88
RAPGEF1-206ENST00000438647 ZNF555Q8NEP9 628 aa20.56■□□□□ 0.88
RAPGEF1-206ENST00000438647 ZNF671Q8TAW3 534 aa20.56■□□□□ 0.88
RAPGEF1-206ENST00000438647 DNTTIP1Q9H147 329 aa20.56■□□□□ 0.88
RAPGEF1-206ENST00000438647 C8orf4Q9NR00 106 aa20.56■□□□□ 0.88
RAPGEF1-206ENST00000438647 ACOXLQ9NUZ1 547 aa20.56■□□□□ 0.88
RAPGEF1-206ENST00000438647 EXOGQ9Y2C4 368 aaKnown RBP20.56■□□□□ 0.88
RAPGEF1-206ENST00000438647 C22orf46C9J442 243 aa20.55■□□□□ 0.88
RAPGEF1-206ENST00000438647 AKR7A2O43488 359 aa20.55■□□□□ 0.88
RAPGEF1-206ENST00000438647 ECDO95905 644 aaPredicted RBP20.55■□□□□ 0.88
RAPGEF1-206ENST00000438647 UBCP0CG48 685 aaKnown RBP20.55■□□□□ 0.88
RAPGEF1-206ENST00000438647 ACTA2P62736 377 aa20.55■□□□□ 0.88
RAPGEF1-206ENST00000438647 ACTG2P63267 376 aa20.55■□□□□ 0.88
RAPGEF1-206ENST00000438647 SRSF2Q01130 221 aaKnown RBP20.55■□□□□ 0.88
RAPGEF1-206ENST00000438647 ZNF91Q05481 1191 aa20.55■□□□□ 0.88
RAPGEF1-206ENST00000438647 ODF4Q2M2E3 257 aa20.55■□□□□ 0.88
RAPGEF1-206ENST00000438647 CDONQ4KMG0 1287 aa20.55■□□□□ 0.88
RAPGEF1-206ENST00000438647 WDR38Q5JTN6 314 aa20.55■□□□□ 0.88
RAPGEF1-206ENST00000438647 SMURF1Q9HCE7 757 aa20.55■□□□□ 0.88
RAPGEF1-206ENST00000438647 DVL1O14640 695 aa20.54■□□□□ 0.88
RAPGEF1-206ENST00000438647 GLRA1P23415 457 aa20.54■□□□□ 0.88
RAPGEF1-206ENST00000438647 GMFBP60983 142 aa20.54■□□□□ 0.88
RAPGEF1-206ENST00000438647 STUMQ69YW2 141 aa20.54■□□□□ 0.88
RAPGEF1-206ENST00000438647 HAGHLQ6PII5 290 aaPredicted RBP20.54■□□□□ 0.88
RAPGEF1-206ENST00000438647 ZNF573Q86YE8 665 aa20.54■□□□□ 0.88
RAPGEF1-206ENST00000438647 PNLDC1Q8NA58 520 aaKnown RBP20.54■□□□□ 0.88
RAPGEF1-206ENST00000438647 UPRTQ96BW1 309 aa20.54■□□□□ 0.88
RAPGEF1-206ENST00000438647 LGALS12Q96DT0 336 aa20.54■□□□□ 0.88
RAPGEF1-206ENST00000438647 CCL13Q99616 98 aa20.54■□□□□ 0.88
RAPGEF1-206ENST00000438647 C19orf24Q9BVV8 132 aa20.54■□□□□ 0.88
RAPGEF1-206ENST00000438647 NKX6-3A6NJ46 265 aa20.53■□□□□ 0.88
RAPGEF1-206ENST00000438647 GPR37O15354 613 aa20.53■□□□□ 0.88
RAPGEF1-206ENST00000438647 FADS2O95864 444 aaKnown RBP20.53■□□□□ 0.88
RAPGEF1-206ENST00000438647 DBTP11182 482 aaKnown RBP20.53■□□□□ 0.88
RAPGEF1-206ENST00000438647 HILS1P60008 231 aa20.53■□□□□ 0.88
RAPGEF1-206ENST00000438647 ATPAF1Q5TC12 328 aaPredicted RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms