RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 SCRN3Q0VDG4 424 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 DCAF12Q5T6F0 453 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 TMPRSS7Q7RTY8 843 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 SVBPQ8N300 66 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 OXGR1Q96P68 337 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 POTEKPQ9BYX7 375 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 RASL12Q9NYN1 266 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 MBD2Q9UBB5 411 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 KCNK7Q9Y2U2 307 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 ADGRG4Q8IZF6 3080 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 ABCD4O14678 606 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 BLVRBP30043 206 aaPredicted RBP13.7□□□□□ -0.22
SCARF1-203ENST00000434376 DHRS2Q13268 280 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 SNAI3Q3KNW1 292 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 TOMM40LQ969M1 308 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 PARP12Q9H0J9 701 aaKnown RBP13.7□□□□□ -0.22
SCARF1-203ENST00000434376 ESRP2Q9H6T0 727 aaKnown RBP13.7□□□□□ -0.22
SCARF1-203ENST00000434376 COL6A6A6NMZ7 2263 aa13.7□□□□□ -0.22
SCARF1-203ENST00000434376 CCDC187A0A096LP49 1063 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 OR6C65A6NJZ3 312 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 DUSP1P28562 367 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 NTF4P34130 210 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 RAB13P51153 203 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 RRADP55042 308 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 IL13RA1P78552 427 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 PDZK1IP1Q13113 114 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 PLEKHN1Q494U1 663 aaPredicted RBP13.69□□□□□ -0.22
SCARF1-203ENST00000434376 OR2Y1Q8NGV0 311 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 DCUN1D4Q92564 292 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 TMEM59Q9BXS4 323 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 CHRNA10Q9GZZ6 450 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 CST11Q9H112 138 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 C12orf49Q9H741 205 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 PARPBPQ9NWS1 579 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 UPB1Q9UBR1 384 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 PINLYPA6NC86 204 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 AQP8O94778 261 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 CER1O95813 267 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 S100A6P06703 90 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 RPA2P15927 270 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 AGTR1P30556 359 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 ATRXP46100 2492 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 OR3A2P47893 321 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 FXYD4P59646 89 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 AIMP2Q13155 320 aaKnown RBP13.69□□□□□ -0.22
SCARF1-203ENST00000434376 TMEM200AQ86VY9 491 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 CLEC1AQ8NC01 280 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 CT55Q8WUE5 264 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 TAS2R8Q9NYW2 309 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 LRFN1Q9P244 771 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 NUP210LQ5VU65 1888 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 LNP1A1A4G5 178 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 WIPF3A6NGB9 483 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 ZIC3O60481 467 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 SUCLG1P53597 346 aaKnown RBP13.69□□□□□ -0.22
SCARF1-203ENST00000434376 B2MP61769 119 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 PPIAP62937 165 aaKnown RBP13.69□□□□□ -0.22
SCARF1-203ENST00000434376 C6orf201Q7Z4U5 140 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 MAML2Q8IZL2 1156 aaPredicted RBP13.69□□□□□ -0.22
SCARF1-203ENST00000434376 PAQR4Q8N4S7 273 aaPredicted RBP13.69□□□□□ -0.22
SCARF1-203ENST00000434376 RAB3CQ96E17 227 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 FOXJ2Q9P0K8 574 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 IL17BQ9UHF5 180 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 TCFL5Q9UL49 500 aa13.69□□□□□ -0.22
SCARF1-203ENST00000434376 MED13LQ71F56 2210 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 PRSS44E7EML9 344 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 RAB27BO00194 218 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 GP1BAP07359 652 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 ERCC1P07992 297 aaPredicted RBP13.68□□□□□ -0.22
SCARF1-203ENST00000434376 EDN3P14138 238 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 HTR5AP47898 357 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 TAS2R19P59542 299 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 ACTBP60709 375 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 ACTG1P63261 375 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 SLC35A1P78382 337 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 Q0VFX4 171 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 SLC22A24Q8N4F4 322 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 ELP5Q8TE02 316 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 TLNRD1Q9H1K6 362 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 CHMP1AQ9HD42 196 aaPredicted RBP13.68□□□□□ -0.22
SCARF1-203ENST00000434376 DEPPQ9NTK1 212 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 MED9Q9NWA0 146 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 ANKRD11Q6UB99 2663 aaPredicted RBP13.68□□□□□ -0.22
SCARF1-203ENST00000434376 A0A0D9SG52 128 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 M0R135 149 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 HOXB5P09067 269 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 NPBWR1P48145 328 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 FOXG1P55316 489 aaPredicted RBP13.68□□□□□ -0.22
SCARF1-203ENST00000434376 PPP1R1AQ13522 171 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 CEACAM16Q2WEN9 425 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 PABPC1L2AQ5JQF8 200 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 ACER2Q5QJU3 275 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 AAED1Q7RTV5 226 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 PIGCQ92535 297 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 ZNF799Q96GE5 643 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 BIN3Q9NQY0 253 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 PCDHGA1Q9Y5H4 931 aa13.68□□□□□ -0.22
SCARF1-203ENST00000434376 TMEM218A2RU14 115 aa13.67□□□□□ -0.22
SCARF1-203ENST00000434376 DHHO43323 396 aa13.67□□□□□ -0.22
SCARF1-203ENST00000434376 S100A9P06702 114 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms