RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 TMEM225Q6GV28 225 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 ZNF529Q6P280 563 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 OPN5Q6U736 354 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 MED25Q71SY5 747 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 FJX1Q86VR8 437 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 LRRC18Q8N456 261 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 D2HGDHQ8N465 521 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 OR2A1Q8NGT9 310 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 SLC25A43Q8WUT9 341 aaPredicted RBP6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 HPSE2Q8WWQ2 592 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 NKD1Q969G9 470 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 TMEM230Q96A57 120 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 MVB12AQ96EY5 273 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 PTCHD1Q96NR3 888 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 MACROD1Q9BQ69 325 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 ARV1Q9H2C2 271 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 SMDT1Q9H4I9 107 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 ZMAT3Q9HA38 289 aaKnown RBP6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 KCNJ16Q9NPI9 418 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 FAM212BQ9NTI7 297 aaPredicted RBP6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 OCIAD1Q9NX40 245 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 SOHLH2Q9NX45 425 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 PRODH2Q9UF12 536 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 LAMP5Q9UJQ1 280 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 TUBD1Q9UJT1 453 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 IKZF2Q9UKS7 526 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 ZNF346Q9UL40 294 aaKnown RBP6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 B3GALT1Q9Y5Z6 326 aa6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 MRPS18BQ9Y676 258 aaKnown RBP6.82□□□□□ -1.32
CNKSR3-202ENST00000433165 FITM1A5D6W6 292 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 ZNF354AO60765 605 aaPredicted RBP6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 DANCRP0C864 163 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 SUCLG1P53597 346 aaKnown RBP6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 GFERP55789 205 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 PRPS1P60891 318 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 TNFRSF9Q07011 255 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 KIR2DS3Q14952 304 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 ELOBQ15370 118 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 GFI1BQ5VTD9 330 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 TRAPPC6BQ86SZ2 158 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 KDM8Q8N371 416 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 COX18Q8N8Q8 333 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 MARCH1Q8TCQ1 289 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 ST7LQ8TDW4 575 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 OR6C1Q96RD1 312 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 GPR87Q9BY21 358 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 EIF5A2Q9GZV4 153 aaKnown RBP6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 WDR76Q9H967 626 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 UNKLQ9H9P5 680 aaKnown RBP6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 MKKSQ9NPJ1 570 aaPredicted RBP6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 PILRAQ9UKJ1 303 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 GTF2A1LQ9UNN4 478 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 GPR132Q9UNW8 380 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 C19orf53Q9UNZ5 99 aaPredicted RBP6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 ARHGEF17Q96PE2 2063 aaPredicted RBP6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 GOLGA4Q13439 2230 aaKnown RBP6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 KNL1Q8NG31 2342 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 MARCH11A6NNE9 402 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 H3BSH0 61 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 ZNF264O43296 627 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 IGHEP01854 428 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 SEC11BP0C7V7 166 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 CHATP28329 748 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 IL2RGP31785 369 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 NKX6-1P78426 367 aaPredicted RBP6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 HNF4GQ14541 408 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 USF2Q15853 346 aaPredicted RBP6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 ZNF674Q2M3X9 581 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 C1orf100Q5SVJ3 147 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 ZNF385CQ66K41 422 aaPredicted RBP6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 ULK3Q6PHR2 472 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 CLEC18BQ6UXF7 455 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 TTLL10Q6ZVT0 673 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 GVQW1Q8N7I0 195 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 CDRT4Q8N9R6 151 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 CD300LFQ8TDQ1 290 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 Q8WTZ3 238 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 CA5BP1Q8WTZ4 195 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 COL26A1Q96A83 441 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 R3HDM4Q96D70 268 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 OR10C1Q96KK4 312 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 TSSK2Q96PF2 358 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 NKX3-1Q99801 234 aaPredicted RBP6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 PBDC1Q9BVG4 233 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 SUCNR1Q9BXA5 334 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 FBXL17Q9UF56 701 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 RHBDD3Q9Y3P4 386 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 MMP24Q9Y5R2 645 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 TMEM14AQ9Y6G1 99 aa6.81□□□□□ -1.32
CNKSR3-202ENST00000433165 SPTBN2O15020 2390 aa6.8□□□□□ -1.32
CNKSR3-202ENST00000433165 RP1P56715 2156 aa6.8□□□□□ -1.32
CNKSR3-202ENST00000433165 MEGF11A6BM72 1044 aa6.8□□□□□ -1.32
CNKSR3-202ENST00000433165 C9J4A7 227 aa6.8□□□□□ -1.32
CNKSR3-202ENST00000433165 GMFGO60234 142 aa6.8□□□□□ -1.32
CNKSR3-202ENST00000433165 NME2P1O60361 137 aa6.8□□□□□ -1.32
CNKSR3-202ENST00000433165 CXCL1P09341 107 aa6.8□□□□□ -1.32
CNKSR3-202ENST00000433165 FGF7P21781 194 aa6.8□□□□□ -1.32
CNKSR3-202ENST00000433165 CXCR1P25024 350 aa6.8□□□□□ -1.32
CNKSR3-202ENST00000433165 SUPT4H1P63272 117 aaKnown RBP6.8□□□□□ -1.32
CNKSR3-202ENST00000433165 JOSD1Q15040 202 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms