RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 C9orf106Q8NAJ2 232 aa14.44□□□□□ -0.1
USHBP1-203ENST00000431146 CCDC54Q8NEL0 328 aa14.44□□□□□ -0.1
USHBP1-203ENST00000431146 PIGCQ92535 297 aa14.44□□□□□ -0.1
USHBP1-203ENST00000431146 BCL2L2Q92843 193 aaPredicted RBP14.44□□□□□ -0.1
USHBP1-203ENST00000431146 SCNM1Q9BWG6 230 aa14.44□□□□□ -0.1
USHBP1-203ENST00000431146 OR51B6Q9H340 312 aa14.44□□□□□ -0.1
USHBP1-203ENST00000431146 INTS1Q8N201 2190 aaKnown RBP14.44□□□□□ -0.1
USHBP1-203ENST00000431146 SULT1C2O00338 296 aa14.44□□□□□ -0.1
USHBP1-203ENST00000431146 XRCC2O43543 280 aa14.44□□□□□ -0.1
USHBP1-203ENST00000431146 ANGPTL7O43827 346 aa14.44□□□□□ -0.1
USHBP1-203ENST00000431146 PEX14O75381 377 aa14.44□□□□□ -0.1
USHBP1-203ENST00000431146 NRASP01111 189 aa14.44□□□□□ -0.1
USHBP1-203ENST00000431146 HPXP02790 462 aa14.44□□□□□ -0.1
USHBP1-203ENST00000431146 ANXA7P20073 488 aaKnown RBP14.44□□□□□ -0.1
USHBP1-203ENST00000431146 FAUP35544 74 aaKnown RBP14.44□□□□□ -0.1
USHBP1-203ENST00000431146 ARR3P36575 388 aa14.44□□□□□ -0.1
USHBP1-203ENST00000431146 IGFL3Q6UXB1 125 aa14.44□□□□□ -0.1
USHBP1-203ENST00000431146 TFAP2EQ6VUC0 442 aa14.44□□□□□ -0.1
USHBP1-203ENST00000431146 IDO2Q6ZQW0 420 aa14.44□□□□□ -0.1
USHBP1-203ENST00000431146 COLCA1Q6ZS62 124 aa14.44□□□□□ -0.1
USHBP1-203ENST00000431146 SARAFQ96BY9 339 aa14.44□□□□□ -0.1
USHBP1-203ENST00000431146 TINAGL1Q9GZM7 467 aaPredicted RBP14.44□□□□□ -0.1
USHBP1-203ENST00000431146 MED28Q9H204 178 aa14.44□□□□□ -0.1
USHBP1-203ENST00000431146 OR51J1Q9H342 316 aa14.44□□□□□ -0.1
USHBP1-203ENST00000431146 RGCCQ9H4X1 137 aa14.44□□□□□ -0.1
USHBP1-203ENST00000431146 SCPEP1Q9HB40 452 aa14.44□□□□□ -0.1
USHBP1-203ENST00000431146 SMLR1H3BR10 107 aa14.43□□□□□ -0.1
USHBP1-203ENST00000431146 RAD51DO75771 328 aa14.43□□□□□ -0.1
USHBP1-203ENST00000431146 LYZL6O75951 148 aa14.43□□□□□ -0.1
USHBP1-203ENST00000431146 MGMTP16455 207 aa14.43□□□□□ -0.1
USHBP1-203ENST00000431146 RAD52P43351 418 aa14.43□□□□□ -0.1
USHBP1-203ENST00000431146 TMEM50BP56557 158 aa14.43□□□□□ -0.1
USHBP1-203ENST00000431146 NHLH1Q02575 133 aa14.43□□□□□ -0.1
USHBP1-203ENST00000431146 GK2Q14410 553 aaPredicted RBP14.43□□□□□ -0.1
USHBP1-203ENST00000431146 OR8B8Q15620 311 aa14.43□□□□□ -0.1
USHBP1-203ENST00000431146 TSC22D1Q15714 1073 aa14.43□□□□□ -0.1
USHBP1-203ENST00000431146 CLVS2Q5SYC1 327 aa14.43□□□□□ -0.1
USHBP1-203ENST00000431146 OR52W1Q6IF63 320 aa14.43□□□□□ -0.1
USHBP1-203ENST00000431146 ZNF585AQ6P3V2 769 aa14.43□□□□□ -0.1
USHBP1-203ENST00000431146 VWA1Q6PCB0 445 aa14.43□□□□□ -0.1
USHBP1-203ENST00000431146 FAM214BQ7L5A3 538 aa14.43□□□□□ -0.1
USHBP1-203ENST00000431146 MDP1Q86V88 176 aa14.43□□□□□ -0.1
USHBP1-203ENST00000431146 OR51T1Q8NGJ9 327 aa14.43□□□□□ -0.1
USHBP1-203ENST00000431146 POM121L2Q96KW2 1035 aa14.43□□□□□ -0.1
USHBP1-203ENST00000431146 S100A13Q99584 98 aa14.43□□□□□ -0.1
USHBP1-203ENST00000431146 GP6Q9HCN6 339 aa14.43□□□□□ -0.1
USHBP1-203ENST00000431146 CRIM1Q9NZV1 1036 aa14.43□□□□□ -0.1
USHBP1-203ENST00000431146 KCNK7Q9Y2U2 307 aa14.43□□□□□ -0.1
USHBP1-203ENST00000431146 PRR14LQ5THK1 2151 aa14.43□□□□□ -0.1
USHBP1-203ENST00000431146 NDUFB6O95139 128 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 CYB5AP00167 134 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 CSN2P05814 226 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 UBBP0CG47 229 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 TMEM225BP0DP42 221 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 TAS2R19P59542 299 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 PLP2Q04941 152 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 MOB3CQ70IA8 216 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 SPSB4Q96A44 273 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 RAB3CQ96E17 227 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 ARHGAP5-AS1Q96IT6 56 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 GINS4Q9BRT9 223 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 ACTR6Q9GZN1 396 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 CST11Q9H112 138 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 POFUT1Q9H488 388 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 PLSCR2Q9NRY7 297 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 ZNF391Q9UJN7 358 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 STARD10Q9Y365 291 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 SPEF1Q9Y4P9 236 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 PYCARD-AS1I3L0S3 204 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 RAB3DO95716 219 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 IGHV1-2P23083 117 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 ZP1P60852 638 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 RPS27AP62979 156 aaKnown RBP14.42□□□□□ -0.1
USHBP1-203ENST00000431146 FOXF2Q12947 444 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 CNN3Q15417 329 aaKnown RBP14.42□□□□□ -0.1
USHBP1-203ENST00000431146 PLCXD3Q63HM9 321 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 TMEM42Q69YG0 159 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 MYPOPQ86VE0 399 aaPredicted RBP14.42□□□□□ -0.1
USHBP1-203ENST00000431146 RBMXL3Q8N7X1 1067 aaKnown RBP14.42□□□□□ -0.1
USHBP1-203ENST00000431146 OR11H7Q8NGC8 314 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 OR56B2PQ8NGI1 322 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 SPSB1Q96BD6 273 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 BORCS8Q96FH0 119 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 ZNF486Q96H40 463 aaPredicted RBP14.42□□□□□ -0.1
USHBP1-203ENST00000431146 SEC22CQ9BRL7 303 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 PTTG3PQ9NZH4 202 aa14.42□□□□□ -0.1
USHBP1-203ENST00000431146 RP1L1Q8IWN7 2480 aaPredicted RBP14.41□□□□□ -0.1
USHBP1-203ENST00000431146 ZNF850A8MQ14 1090 aa14.41□□□□□ -0.1
USHBP1-203ENST00000431146 SSX5O60225 188 aa14.41□□□□□ -0.1
USHBP1-203ENST00000431146 COX5BP10606 129 aa14.41□□□□□ -0.1
USHBP1-203ENST00000431146 RAG2P55895 527 aa14.41□□□□□ -0.1
USHBP1-203ENST00000431146 TAGLNQ01995 201 aaKnown RBP14.41□□□□□ -0.1
USHBP1-203ENST00000431146 SSBP1Q04837 148 aaKnown RBP14.41□□□□□ -0.1
USHBP1-203ENST00000431146 FAM122CQ6P4D5 195 aa14.41□□□□□ -0.1
USHBP1-203ENST00000431146 Q6ZS92 163 aa14.41□□□□□ -0.1
USHBP1-203ENST00000431146 FGD2Q7Z6J4 655 aa14.41□□□□□ -0.1
USHBP1-203ENST00000431146 LILRB2Q8N423 598 aa14.41□□□□□ -0.1
USHBP1-203ENST00000431146 TMEM229BQ8NBD8 167 aa14.41□□□□□ -0.1
USHBP1-203ENST00000431146 URM1Q9BTM9 101 aaKnown RBP14.41□□□□□ -0.1
USHBP1-203ENST00000431146 GPR160Q9UJ42 338 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms