RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 PAX6P26367 422 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 GNALP38405 381 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 CEBPDP49716 269 aaPredicted RBP9.66□□□□□ -0.86
HDAC4-202ENST00000430200 CRISP1P54107 249 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 SLC35D3Q5M8T2 416 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 HIST2H2BDQ6DRA6 164 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 KRT74Q7RTS7 529 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 KRT77Q7Z794 578 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 ZDHHC23Q8IYP9 409 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 BATF2Q8N1L9 274 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 C8orf46Q8TAG6 207 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 OR51E1Q8TCB6 317 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 AJUBAQ96IF1 538 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 FAM71F1Q96KD3 344 aaPredicted RBP9.66□□□□□ -0.86
HDAC4-202ENST00000430200 OR8B4Q96RC9 309 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 OR51I2Q9H344 312 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 RGCCQ9H4X1 137 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 SP140LQ9H930 580 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 NOX4Q9NPH5 578 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 GPR84Q9NQS5 396 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 PAPOLBQ9NRJ5 636 aaKnown RBP9.66□□□□□ -0.86
HDAC4-202ENST00000430200 TVP23BQ9NYZ1 205 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 ZNRD1Q9P1U0 126 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 ZNF391Q9UJN7 358 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 MAB21L2Q9Y586 359 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 MMP24Q9Y5R2 645 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 MPC1Q9Y5U8 109 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 KPTNQ9Y664 436 aa9.66□□□□□ -0.86
HDAC4-202ENST00000430200 TMEM210A6NLX4 147 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 ANXA2P2A6NMY6 339 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 ZNF732B4DXR9 585 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 SIGLEC5O15389 551 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 GYG2O15488 501 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 SYNGR1O43759 233 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 NDUFA7O95182 113 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 APOC1P02654 83 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 HMGN1P05114 100 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 LIPFP07098 398 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 ANXA8P13928 327 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 CFL1P23528 166 aaKnown RBP9.65□□□□□ -0.86
HDAC4-202ENST00000430200 IER3P46695 156 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 EFNB1P98172 346 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 IL5RAQ01344 420 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 ROM1Q03395 351 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 PDCD1Q15116 288 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 PTGES3Q15185 160 aaKnown RBP9.65□□□□□ -0.86
HDAC4-202ENST00000430200 SNAPC1Q16533 368 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 DNAL1Q4LDG9 190 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 ATPAF1Q5TC12 328 aaPredicted RBP9.65□□□□□ -0.86
HDAC4-202ENST00000430200 AADACL4Q5VUY2 407 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 ZNRF1Q8ND25 227 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 OR10Z1Q8NGY1 313 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 BCAS4Q8TDM0 211 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 H1FXQ92522 213 aaKnown RBP9.65□□□□□ -0.86
HDAC4-202ENST00000430200 C12orf43Q96C57 262 aaKnown RBP9.65□□□□□ -0.86
HDAC4-202ENST00000430200 RNF170Q96K19 258 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 CITED1Q99966 193 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 MICU1Q9BPX6 476 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 YIPF3Q9GZM5 350 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 PBOV1Q9GZY1 135 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 SLITRK2Q9H156 845 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 CNTD2Q9H8S5 307 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 ADGRL4Q9HBW9 690 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 LAMP5Q9UJQ1 280 aa9.65□□□□□ -0.86
HDAC4-202ENST00000430200 A0A0U1RQV5 110 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 ZNF816-ZNF321PA0A0X1KG74 233 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 A0A1B0GTI1 187 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 TMEM269A0A1B0GVZ9 245 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 A6NIN4 97 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 OR2AT4A6NND4 320 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 ZAR1LA6NP61 321 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 DNAJC8O75937 253 aaPredicted RBP9.64□□□□□ -0.87
HDAC4-202ENST00000430200 APOL3O95236 402 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 ECDO95905 644 aaPredicted RBP9.64□□□□□ -0.87
HDAC4-202ENST00000430200 PSG2P11465 335 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 SAA4P35542 130 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 POLR2IP36954 125 aaKnown RBP9.64□□□□□ -0.87
HDAC4-202ENST00000430200 MZT1Q08AG7 82 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 SLX4IPQ5VYV7 408 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 C12orf73Q69YU5 71 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 METAP1DQ6UB28 335 aaPredicted RBP9.64□□□□□ -0.87
HDAC4-202ENST00000430200 TREML4Q6UXN2 200 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 KCTD8Q6ZWB6 473 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 SLC36A1Q7Z2H8 476 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.64□□□□□ -0.87
HDAC4-202ENST00000430200 TMEM86BQ8N661 226 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 CD177Q8N6Q3 437 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 LINC01006Q8NI28 216 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 SSMEM1Q8WWF3 244 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 AQP3Q92482 292 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 CNN2Q99439 309 aaKnown RBP9.64□□□□□ -0.87
HDAC4-202ENST00000430200 APOL4Q9BPW4 351 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 ZNF556Q9HAH1 456 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 C19orf12Q9NSK7 152 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 KIF17Q9P2E2 1029 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 NLKQ9UBE8 527 aa9.64□□□□□ -0.87
HDAC4-202ENST00000430200 SLC25A10Q9UBX3 287 aaPredicted RBP9.64□□□□□ -0.87
HDAC4-202ENST00000430200 NUFIP1Q9UHK0 495 aaKnown RBP9.64□□□□□ -0.87
HDAC4-202ENST00000430200 MRM2Q9UI43 246 aaKnown RBP9.64□□□□□ -0.87
HDAC4-202ENST00000430200 POMT1Q9Y6A1 747 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms