RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 NIPAL2Q9H841 368 aa14.04□□□□□ -0.16
TRIM39-209ENST00000428728 SLC25A10Q9UBX3 287 aaPredicted RBP14.04□□□□□ -0.16
TRIM39-209ENST00000428728 RNF114Q9Y508 228 aa14.04□□□□□ -0.16
TRIM39-209ENST00000428728 MEGF8Q7Z7M0 2845 aa14.03□□□□□ -0.16
TRIM39-209ENST00000428728 RNASEK-C17orf49H0YIS7 233 aa14.03□□□□□ -0.16
TRIM39-209ENST00000428728 GPR37O15354 613 aa14.03□□□□□ -0.16
TRIM39-209ENST00000428728 NDUFB7P17568 137 aa14.03□□□□□ -0.16
TRIM39-209ENST00000428728 TGM4P49221 684 aa14.03□□□□□ -0.16
TRIM39-209ENST00000428728 RPL15P61313 204 aaKnown RBP14.03□□□□□ -0.16
TRIM39-209ENST00000428728 CBX1P83916 185 aa14.03□□□□□ -0.16
TRIM39-209ENST00000428728 DEFA6Q01524 100 aa14.03□□□□□ -0.16
TRIM39-209ENST00000428728 FLOT2Q14254 428 aa14.03□□□□□ -0.16
TRIM39-209ENST00000428728 DGUOKQ16854 277 aa14.03□□□□□ -0.16
TRIM39-209ENST00000428728 CEP78Q5JTW2 689 aa14.03□□□□□ -0.16
TRIM39-209ENST00000428728 ZNF788Q6ZQV5 615 aa14.03□□□□□ -0.16
TRIM39-209ENST00000428728 PNKDQ8N490 385 aa14.03□□□□□ -0.16
TRIM39-209ENST00000428728 Q8N7P7 452 aa14.03□□□□□ -0.16
TRIM39-209ENST00000428728 C8orf46Q8TAG6 207 aa14.03□□□□□ -0.16
TRIM39-209ENST00000428728 HIST1H2AAQ96QV6 131 aa14.03□□□□□ -0.16
TRIM39-209ENST00000428728 DNTTIP1Q9H147 329 aa14.03□□□□□ -0.16
TRIM39-209ENST00000428728 DPAGT1Q9H3H5 408 aa14.03□□□□□ -0.16
TRIM39-209ENST00000428728 ELL3Q9HB65 397 aaPredicted RBP14.03□□□□□ -0.16
TRIM39-209ENST00000428728 SLC25A19Q9HC21 320 aa14.03□□□□□ -0.16
TRIM39-209ENST00000428728 CAB39Q9Y376 341 aaPredicted RBP14.03□□□□□ -0.16
TRIM39-209ENST00000428728 WNK1Q9H4A3 2382 aa14.02□□□□□ -0.16
TRIM39-209ENST00000428728 ZNF816-ZNF321PA0A0X1KG74 233 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 A0A1W2PQ09 198 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 BTBD17A6NE02 478 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 ZNF732B4DXR9 585 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 NPFFO15130 113 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 FKBP6O75344 327 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 RHBDL1O75783 438 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 FBP1P09467 338 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 ANXA8P13928 327 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 ALOX5APP20292 161 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 GLRA1P23415 457 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 EEF1B2P24534 225 aaKnown RBP14.02□□□□□ -0.17
TRIM39-209ENST00000428728 DCTDP32321 178 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 MAP2K3P46734 347 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 GABRA2P47869 451 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 GUCA2AQ02747 115 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 SNAPC1Q16533 368 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 ATPAF1Q5TC12 328 aaPredicted RBP14.02□□□□□ -0.17
TRIM39-209ENST00000428728 METAP1DQ6UB28 335 aaPredicted RBP14.02□□□□□ -0.17
TRIM39-209ENST00000428728 ANGPTL6Q8NI99 470 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 LRTOMTQ8WZ04 291 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 CITED1Q99966 193 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 TEX12Q9BXU0 123 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 FAM206AQ9NX38 181 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 TVP23BQ9NYZ1 205 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 ZNRD1Q9P1U0 126 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 NLKQ9UBE8 527 aa14.02□□□□□ -0.17
TRIM39-209ENST00000428728 TET2Q6N021 2002 aaPredicted RBP14.02□□□□□ -0.17
TRIM39-209ENST00000428728 CCDC182A6NF36 153 aa14.01□□□□□ -0.17
TRIM39-209ENST00000428728 OR2AT4A6NND4 320 aa14.01□□□□□ -0.17
TRIM39-209ENST00000428728 SIGLEC5O15389 551 aa14.01□□□□□ -0.17
TRIM39-209ENST00000428728 KRTAP10-3P60369 221 aa14.01□□□□□ -0.17
TRIM39-209ENST00000428728 GNG3P63215 75 aa14.01□□□□□ -0.17
TRIM39-209ENST00000428728 TAF9Q16594 264 aa14.01□□□□□ -0.17
TRIM39-209ENST00000428728 MIDNQ504T8 468 aa14.01□□□□□ -0.17
TRIM39-209ENST00000428728 LCN1P1Q5VSP4 162 aa14.01□□□□□ -0.17
TRIM39-209ENST00000428728 DHRS7BQ6IAN0 325 aaPredicted RBP14.01□□□□□ -0.17
TRIM39-209ENST00000428728 KCTD18Q6PI47 426 aaPredicted RBP14.01□□□□□ -0.17
TRIM39-209ENST00000428728 GDPGP1Q6ZNW5 385 aa14.01□□□□□ -0.17
TRIM39-209ENST00000428728 PAPD5Q8NDF8 572 aaKnown RBP14.01□□□□□ -0.17
TRIM39-209ENST00000428728 TMEM185AQ8NFB2 350 aa14.01□□□□□ -0.17
TRIM39-209ENST00000428728 LINC01006Q8NI28 216 aa14.01□□□□□ -0.17
TRIM39-209ENST00000428728 MED30Q96HR3 178 aa14.01□□□□□ -0.17
TRIM39-209ENST00000428728 YIPF3Q9GZM5 350 aa14.01□□□□□ -0.17
TRIM39-209ENST00000428728 YY1AP1Q9H869 796 aa14.01□□□□□ -0.17
TRIM39-209ENST00000428728 A0A0U1RQV5 110 aa14□□□□□ -0.17
TRIM39-209ENST00000428728 TMEM269A0A1B0GVZ9 245 aa14□□□□□ -0.17
TRIM39-209ENST00000428728 PRR32B1ATL7 298 aa14□□□□□ -0.17
TRIM39-209ENST00000428728 PAHP00439 452 aa14□□□□□ -0.17
TRIM39-209ENST00000428728 FAHP16930 419 aa14□□□□□ -0.17
TRIM39-209ENST00000428728 HOXB6P17509 224 aaKnown RBP14□□□□□ -0.17
TRIM39-209ENST00000428728 SAA4P35542 130 aa14□□□□□ -0.17
TRIM39-209ENST00000428728 FAM76BQ5HYJ3 339 aa14□□□□□ -0.17
TRIM39-209ENST00000428728 PLCXD3Q63HM9 321 aa14□□□□□ -0.17
TRIM39-209ENST00000428728 TRPM8Q7Z2W7 1104 aa14□□□□□ -0.17
TRIM39-209ENST00000428728 THAP5Q7Z6K1 395 aa14□□□□□ -0.17
TRIM39-209ENST00000428728 OR51E1Q8TCB6 317 aa14□□□□□ -0.17
TRIM39-209ENST00000428728 DMRTB1Q96MA1 342 aa14□□□□□ -0.17
TRIM39-209ENST00000428728 PBOV1Q9GZY1 135 aa14□□□□□ -0.17
TRIM39-209ENST00000428728 GPR84Q9NQS5 396 aa14□□□□□ -0.17
TRIM39-209ENST00000428728 PAPOLBQ9NRJ5 636 aaKnown RBP14□□□□□ -0.17
TRIM39-209ENST00000428728 DNAJB9Q9UBS3 223 aa14□□□□□ -0.17
TRIM39-209ENST00000428728 VPREB3Q9UKI3 123 aa14□□□□□ -0.17
TRIM39-209ENST00000428728 IKZF2Q9UKS7 526 aa14□□□□□ -0.17
TRIM39-209ENST00000428728 GTF2A1LQ9UNN4 478 aa14□□□□□ -0.17
TRIM39-209ENST00000428728 COPS3Q9UNS2 423 aa14□□□□□ -0.17
TRIM39-209ENST00000428728 DSCAML1Q8TD84 2053 aa14□□□□□ -0.17
TRIM39-209ENST00000428728 IGKV1D-17A0A075B6S4 117 aa13.99□□□□□ -0.17
TRIM39-209ENST00000428728 MEIOCA2RUB1 952 aa13.99□□□□□ -0.17
TRIM39-209ENST00000428728 M0QZ24 198 aa13.99□□□□□ -0.17
TRIM39-209ENST00000428728 M0R129 80 aa13.99□□□□□ -0.17
TRIM39-209ENST00000428728 GYG2O15488 501 aa13.99□□□□□ -0.17
TRIM39-209ENST00000428728 ACAA1P09110 424 aaPredicted RBP13.99□□□□□ -0.17
TRIM39-209ENST00000428728 PSG2P11465 335 aa13.99□□□□□ -0.17
TRIM39-209ENST00000428728 CAPZA1P52907 286 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms