RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 OR5P3Q8WZ94 311 aa13.49□□□□□ -0.25
VARS-216ENST00000428445 RNF170Q96K19 258 aa13.49□□□□□ -0.25
VARS-216ENST00000428445 INTS14Q96SY0 518 aa13.49□□□□□ -0.25
VARS-216ENST00000428445 OR10A2Q9H208 303 aa13.49□□□□□ -0.25
VARS-216ENST00000428445 CMC2Q9NRP2 79 aa13.49□□□□□ -0.25
VARS-216ENST00000428445 ARL8BQ9NVJ2 186 aa13.49□□□□□ -0.25
VARS-216ENST00000428445 FBLN5Q9UBX5 448 aa13.49□□□□□ -0.25
VARS-216ENST00000428445 ARL2BPQ9Y2Y0 163 aa13.49□□□□□ -0.25
VARS-216ENST00000428445 RIIAD1A6NNX1 92 aa13.48□□□□□ -0.25
VARS-216ENST00000428445 ACAA1P09110 424 aaPredicted RBP13.48□□□□□ -0.25
VARS-216ENST00000428445 H2BFMP0C1H6 154 aa13.48□□□□□ -0.25
VARS-216ENST00000428445 ZNF3P17036 446 aa13.48□□□□□ -0.25
VARS-216ENST00000428445 ATP6V1B2P21281 511 aa13.48□□□□□ -0.25
VARS-216ENST00000428445 GSTT1P30711 240 aa13.48□□□□□ -0.25
VARS-216ENST00000428445 OPRL1P41146 370 aa13.48□□□□□ -0.25
VARS-216ENST00000428445 IL5RAQ01344 420 aa13.48□□□□□ -0.25
VARS-216ENST00000428445 HERPUD1Q15011 391 aa13.48□□□□□ -0.25
VARS-216ENST00000428445 FAM189A2Q15884 450 aa13.48□□□□□ -0.25
VARS-216ENST00000428445 OR10Z1Q8NGY1 313 aa13.48□□□□□ -0.25
VARS-216ENST00000428445 RTL8AQ9BWD3 113 aa13.48□□□□□ -0.25
VARS-216ENST00000428445 OR51V1Q9H2C8 321 aa13.48□□□□□ -0.25
VARS-216ENST00000428445 MAB21L2Q9Y586 359 aa13.48□□□□□ -0.25
VARS-216ENST00000428445 MPC1Q9Y5U8 109 aa13.48□□□□□ -0.25
VARS-216ENST00000428445 IGKV1D-17A0A075B6S4 117 aa13.47□□□□□ -0.25
VARS-216ENST00000428445 NKX6-3A6NJ46 265 aa13.47□□□□□ -0.25
VARS-216ENST00000428445 ANXA2P2A6NMY6 339 aa13.47□□□□□ -0.25
VARS-216ENST00000428445 ANGPTL7O43827 346 aa13.47□□□□□ -0.25
VARS-216ENST00000428445 SELENOFO60613 162 aa13.47□□□□□ -0.25
VARS-216ENST00000428445 EFNB2P52799 333 aa13.47□□□□□ -0.25
VARS-216ENST00000428445 FAM98BQ52LJ0 330 aaKnown RBP13.47□□□□□ -0.25
VARS-216ENST00000428445 FBLN7Q53RD9 439 aa13.47□□□□□ -0.25
VARS-216ENST00000428445 FAM76BQ5HYJ3 339 aa13.47□□□□□ -0.25
VARS-216ENST00000428445 Q6ZPA2 131 aa13.47□□□□□ -0.25
VARS-216ENST00000428445 Q6ZTK2 550 aa13.47□□□□□ -0.25
VARS-216ENST00000428445 PIGWQ7Z7B1 504 aa13.47□□□□□ -0.25
VARS-216ENST00000428445 TIGD4Q8IY51 512 aa13.47□□□□□ -0.25
VARS-216ENST00000428445 FAM185AQ8N0U4 392 aa13.47□□□□□ -0.25
VARS-216ENST00000428445 KLHDC1Q8N7A1 406 aa13.47□□□□□ -0.25
VARS-216ENST00000428445 BEND2Q8NDZ0 799 aa13.47□□□□□ -0.25
VARS-216ENST00000428445 OR5R1Q8NH85 324 aa13.47□□□□□ -0.25
VARS-216ENST00000428445 MED30Q96HR3 178 aa13.47□□□□□ -0.25
VARS-216ENST00000428445 NIPSNAP1Q9BPW8 284 aa13.47□□□□□ -0.25
VARS-216ENST00000428445 YY1AP1Q9H869 796 aa13.47□□□□□ -0.25
VARS-216ENST00000428445 REEP1Q9H902 201 aa13.47□□□□□ -0.25
VARS-216ENST00000428445 NLKQ9UBE8 527 aa13.47□□□□□ -0.25
VARS-216ENST00000428445 KLHDC2Q9Y2U9 406 aa13.47□□□□□ -0.25
VARS-216ENST00000428445 TMEM210A6NLX4 147 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 OR2AT4A6NND4 320 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 H0YAE9 185 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 M0R1W7 72 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 SIGLEC5O15389 551 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 GLCEO94923 617 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 OPN1MWP04001 364 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 OPN1MW2P0DN77 364 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 OPN1MW3P0DN78 364 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 VSIG10L2P0DP72 767 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 PSG2P11465 335 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 HOXB6P17509 224 aaKnown RBP13.46□□□□□ -0.25
VARS-216ENST00000428445 GLRA1P23415 457 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 DCTDP32321 178 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 GPM6AP51674 278 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 HCCSP53701 268 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 HABP2Q14520 560 aaPredicted RBP13.46□□□□□ -0.25
VARS-216ENST00000428445 CEP78Q5JTW2 689 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 SAMD5Q5TGI4 173 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 OR2T5Q6IEZ7 315 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 CRIP3Q6Q6R5 217 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.46□□□□□ -0.25
VARS-216ENST00000428445 MKXQ8IYA7 352 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 ZNF454Q8N9F8 522 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 TMEM185AQ8NFB2 350 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 OR51G2Q8NGK0 314 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 OR2T29Q8NH02 315 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 THEM6Q8WUY1 208 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 METTL8Q9H825 291 aaKnown RBP13.46□□□□□ -0.25
VARS-216ENST00000428445 NIPAL2Q9H841 368 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 C19orf12Q9NSK7 152 aa13.46□□□□□ -0.25
VARS-216ENST00000428445 DNAH3Q8TD57 4116 aa13.46□□□□□ -0.26
VARS-216ENST00000428445 TCRBV5S2A0A599 114 aa13.45□□□□□ -0.26
VARS-216ENST00000428445 CHST1O43916 411 aa13.45□□□□□ -0.26
VARS-216ENST00000428445 CST4P01036 141 aa13.45□□□□□ -0.26
VARS-216ENST00000428445 PAICSP22234 425 aaKnown RBP13.45□□□□□ -0.26
VARS-216ENST00000428445 KIR2DS4P43632 304 aa13.45□□□□□ -0.26
VARS-216ENST00000428445 ACSM1Q08AH1 577 aa13.45□□□□□ -0.26
VARS-216ENST00000428445 TRIM25Q14258 630 aaKnown RBP13.45□□□□□ -0.26
VARS-216ENST00000428445 NSUN5P1Q3KNT7 163 aa13.45□□□□□ -0.26
VARS-216ENST00000428445 OXLD1Q5BKU9 147 aa13.45□□□□□ -0.26
VARS-216ENST00000428445 NCR3LG1Q68D85 454 aa13.45□□□□□ -0.26
VARS-216ENST00000428445 LCN8Q6JVE9 175 aa13.45□□□□□ -0.26
VARS-216ENST00000428445 KRT74Q7RTS7 529 aa13.45□□□□□ -0.26
VARS-216ENST00000428445 DHFR2Q86XF0 187 aa13.45□□□□□ -0.26
VARS-216ENST00000428445 BATF2Q8N1L9 274 aa13.45□□□□□ -0.26
VARS-216ENST00000428445 OR8B12Q8NGG6 310 aa13.45□□□□□ -0.26
VARS-216ENST00000428445 ZNF488Q96MN9 340 aa13.45□□□□□ -0.26
VARS-216ENST00000428445 SF3B6Q9Y3B4 125 aaKnown RBP13.45□□□□□ -0.26
VARS-216ENST00000428445 SAMHD1Q9Y3Z3 626 aaKnown RBP13.45□□□□□ -0.26
VARS-216ENST00000428445 NOTCH3Q9UM47 2321 aa13.45□□□□□ -0.26
VARS-216ENST00000428445 ARRDC5A6NEK1 342 aa13.44□□□□□ -0.26
VARS-216ENST00000428445 ZNF732B4DXR9 585 aa13.44□□□□□ -0.26
VARS-216ENST00000428445 PSMD9O00233 223 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms