RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 TMPRSS9Q7Z410 1059 aa9.52□□□□□ -0.88
ATP2C1-204ENST00000428331 UBAC2Q8NBM4 344 aa9.52□□□□□ -0.88
ATP2C1-204ENST00000428331 SLC38A9Q8NBW4 561 aa9.52□□□□□ -0.88
ATP2C1-204ENST00000428331 KCNK17Q96T54 332 aa9.52□□□□□ -0.88
ATP2C1-204ENST00000428331 RNF122Q9H9V4 155 aa9.52□□□□□ -0.88
ATP2C1-204ENST00000428331 TIMM10BQ9Y5J6 103 aa9.52□□□□□ -0.88
ATP2C1-204ENST00000428331 B3GALT1Q9Y5Z6 326 aa9.52□□□□□ -0.88
ATP2C1-204ENST00000428331 LOC101059948A0A1B0GTJ6 334 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 PAX6P26367 422 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 ID4P47928 161 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 KISS1Q15726 138 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 OGFOD3Q6PK18 319 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 STX12Q86Y82 276 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 LGI3Q8N145 548 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 KDF1Q8NAX2 398 aaPredicted RBP9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 ZNF721Q8TF20 911 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 KLHDC3Q9BQ90 382 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 NAA11Q9BSU3 229 aaPredicted RBP9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 TUBA4BQ9H853 241 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 SDK1Q7Z5N4 2213 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 RP1P56715 2156 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 C17orf51A8MQB3 221 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 GATCO43716 136 aaKnown RBP9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 GPR137BO60478 399 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 ZNF708P17019 499 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 MNX1P50219 401 aaPredicted RBP9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 ZNF266Q14584 549 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 SLAMF9Q96A28 289 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 A0A1W2PP11 408 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 ANKUB1A6NFN9 424 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 CCDC85CA6NKD9 419 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 NPIPB7O75200 414 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 DIRAS3O95661 229 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 DDAH2O95865 285 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 OPN1LWP04000 364 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 CTSDP07339 412 aaPredicted RBP9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 DUSP1P28562 367 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 PIGPP57054 158 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 NKX6-1P78426 367 aaPredicted RBP9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 PLAC9Q5JTB6 97 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 OR8B12Q8NGG6 310 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 SPIN2AQ99865 258 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 SPIN2BQ9BPZ2 258 aa9.52□□□□□ -0.89
ATP2C1-204ENST00000428331 TICRRQ7Z2Z1 1910 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 SPAG17Q6Q759 2223 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 TAGLN2P37802 199 aaKnown RBP9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 FZD2Q14332 565 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 CLINT1Q14677 625 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 ETV3LQ6ZN32 361 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 RNASE11Q8TAA1 199 aaKnown RBP9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 MRGPRFQ96AM1 343 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 CDCA3Q99618 268 aaPredicted RBP9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 RTBDNQ9BSG5 229 aaPredicted RBP9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 NELFAQ9H3P2 528 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 NECAP2Q9NVZ3 263 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 GFOD1Q9NXC2 390 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 IGHV5-51A0A0C4DH38 117 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 MS4A18H0YCH9 400 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 XRCC2O43543 280 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 EIF1BO60739 113 aaKnown RBP9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 DEDDO75618 318 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 LYL1P12980 280 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 EIF1P41567 113 aaKnown RBP9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 MS4A18Q3C1V0 323 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 DMRTC1Q5HYR2 192 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 TMEM182Q6ZP80 229 aaPredicted RBP9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 C9orf40Q8IXQ3 194 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 BHLHE23Q8NDY6 225 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 RTN4IP1Q8WWV3 396 aaPredicted RBP9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 RTN4RQ9BZR6 473 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 GAR1Q9NY12 217 aaKnown RBP9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 IGKV3-11P04433 115 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 SUMO3P55854 103 aaPredicted RBP9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 SHISA6Q6ZSJ9 500 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 FAM131CQ96AQ9 280 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 PECRQ9BY49 303 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 METTL9Q9H1A3 318 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 LANCL2Q9NS86 450 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 RAD51DO75771 328 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 SNCAP37840 140 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 VEGFBP49765 207 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 TMEM50BP56557 158 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 AKR1C8PQ5T2L2 129 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 DMBX1Q8NFW5 382 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 PIGTQ969N2 578 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 MRPL24Q96A35 216 aaKnown RBP9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 IP6K3Q96PC2 410 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 OSGIN2Q9Y236 505 aa9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 UBE2J1Q9Y385 318 aaPredicted RBP9.51□□□□□ -0.89
ATP2C1-204ENST00000428331 A0A1W2PPE2 198 aa9.5□□□□□ -0.89
ATP2C1-204ENST00000428331 LILRA5A6NI73 299 aa9.5□□□□□ -0.89
ATP2C1-204ENST00000428331 RD3LP0DJH9 198 aa9.5□□□□□ -0.89
ATP2C1-204ENST00000428331 IL11P20809 199 aa9.5□□□□□ -0.89
ATP2C1-204ENST00000428331 MTCP1P56278 107 aa9.5□□□□□ -0.89
ATP2C1-204ENST00000428331 NCMAPQ5T1S8 102 aa9.5□□□□□ -0.89
ATP2C1-204ENST00000428331 MEX3BQ6ZN04 569 aaKnown RBP9.5□□□□□ -0.89
ATP2C1-204ENST00000428331 SUCNR1Q9BXA5 334 aa9.5□□□□□ -0.89
ATP2C1-204ENST00000428331 CLDN16Q9Y5I7 305 aa9.5□□□□□ -0.89
ATP2C1-204ENST00000428331 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms