RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 NPEPL1Q8NDH3 523 aa13.02□□□□□ -0.33
PTPN13-203ENST00000427191 VSTM2AQ8TAG5 236 aa13.02□□□□□ -0.33
PTPN13-203ENST00000427191 DOCK2Q92608 1830 aa13.02□□□□□ -0.33
PTPN13-203ENST00000427191 LANCL1O43813 399 aa13.02□□□□□ -0.33
PTPN13-203ENST00000427191 NDUFB6O95139 128 aa13.02□□□□□ -0.33
PTPN13-203ENST00000427191 PPIAP62937 165 aaKnown RBP13.02□□□□□ -0.33
PTPN13-203ENST00000427191 KISS1RQ969F8 398 aaPredicted RBP13.02□□□□□ -0.33
PTPN13-203ENST00000427191 ZDHHC16Q969W1 377 aa13.02□□□□□ -0.33
PTPN13-203ENST00000427191 PTDSS2Q9BVG9 487 aa13.02□□□□□ -0.33
PTPN13-203ENST00000427191 SLC25A5P05141 298 aaKnown RBP13.01□□□□□ -0.33
PTPN13-203ENST00000427191 GNG3P63215 75 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 DGAT2L7PQ6IED9 249 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 SLC25A26Q70HW3 274 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 CYSLTR2Q9NS75 346 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 NQO2P16083 231 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 PCSK6P29122 969 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 OPRK1P41145 380 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 RASL12Q9NYN1 266 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 NAT8Q9UHE5 227 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 HELTA6NFD8 242 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 SLC22A20A6NK97 555 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 FAM74A7A6NL05 159 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 NDUFB3O43676 98 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 OPRM1P35372 400 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 DSCR4P56555 118 aaPredicted RBP13.01□□□□□ -0.33
PTPN13-203ENST00000427191 Q7L0L9 218 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 IGSF23A1L1A6 192 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 AP4M1O00189 453 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 G6PCP35575 357 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 RIGQ13278 110 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 C17orf99Q6UX52 265 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 MMP24Q9Y5R2 645 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 RPS4Y1P22090 263 aaKnown RBP13.01□□□□□ -0.33
PTPN13-203ENST00000427191 CD96P40200 585 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 SLC38A11Q08AI6 406 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 Q56UQ5 140 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 VWA2Q5GFL6 755 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 DPPA3Q6W0C5 159 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 Q6ZN92 141 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 ADPRHL1Q8NDY3 354 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 ACY3Q96HD9 319 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 WDFY2Q96P53 400 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 IDSB3KWA1 339 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 M0R1B8 84 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 ZNF737O75373 536 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 CD99P14209 185 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 FGF9P31371 208 aaPredicted RBP13.01□□□□□ -0.33
PTPN13-203ENST00000427191 GPR3P46089 330 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 NKAIN4Q8IVV8 208 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 ELSPBP1Q96BH3 223 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 K7ERU9 68 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 GATCO43716 136 aaKnown RBP13.01□□□□□ -0.33
PTPN13-203ENST00000427191 RPL30P62888 115 aaKnown RBP13.01□□□□□ -0.33
PTPN13-203ENST00000427191 OR10D4PQ8NGN7 298 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 ZC3HAV1LQ96H79 300 aaKnown RBP13.01□□□□□ -0.33
PTPN13-203ENST00000427191 SLX4Q8IY92 1834 aa13.01□□□□□ -0.33
PTPN13-203ENST00000427191 RREB1Q92766 1687 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 NEURL1O76050 574 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 SURF2Q15527 256 aaPredicted RBP13□□□□□ -0.33
PTPN13-203ENST00000427191 HLA-BQ31612 363 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 OR1L3Q8NH93 324 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 PIK3IP1Q96FE7 263 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 ZNF107Q9UII5 783 aaPredicted RBP13□□□□□ -0.33
PTPN13-203ENST00000427191 PDE6DO43924 150 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 CRYBA1P05813 215 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 ASCL1P50553 236 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 STXBP6Q8NFX7 210 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 KIAA1217Q5T5P2 1943 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 MYADML2A6NDP7 307 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 DEGS2Q6QHC5 323 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 SCGB1D4Q6XE38 83 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 NUDCD2Q8WVJ2 157 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 NUDT16L1Q9BRJ7 211 aaKnown RBP13□□□□□ -0.33
PTPN13-203ENST00000427191 DHCR7Q9UBM7 475 aaKnown RBP13□□□□□ -0.33
PTPN13-203ENST00000427191 TPRP12270 2363 aaKnown RBP13□□□□□ -0.33
PTPN13-203ENST00000427191 SCN3AQ9NY46 2000 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 MAP1LC3B2A6NCE7 125 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 GYPAP02724 150 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 ACVR1Q04771 509 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 MAP1LC3BQ9GZQ8 125 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 KIAA0100Q14667 2235 aaKnown RBP13□□□□□ -0.33
PTPN13-203ENST00000427191 SDCBPO00560 298 aaPredicted RBP13□□□□□ -0.33
PTPN13-203ENST00000427191 RBM45Q8IUH3 476 aaKnown RBP13□□□□□ -0.33
PTPN13-203ENST00000427191 OR1F12Q8NHA8 337 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 LILRB1Q8NHL6 650 aaPredicted RBP13□□□□□ -0.33
PTPN13-203ENST00000427191 HAND1O96004 215 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 PGA4P0DJD7 388 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 PGA5P0DJD9 388 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 CSNK1EP49674 416 aaKnown RBP13□□□□□ -0.33
PTPN13-203ENST00000427191 LSM11P83369 360 aaKnown RBP eCLIP13□□□□□ -0.33
PTPN13-203ENST00000427191 NKAIN2Q5VXU1 208 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 SIRT3Q9NTG7 399 aaPredicted RBP13□□□□□ -0.33
PTPN13-203ENST00000427191 ZNF256Q9Y2P7 627 aaPredicted RBP13□□□□□ -0.33
PTPN13-203ENST00000427191 PCDHGA9Q9Y5G4 932 aaKnown RBP13□□□□□ -0.33
PTPN13-203ENST00000427191 TOGARAM1Q9Y4F4 1720 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 CAPZBP47756 277 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 SLC6A12P48065 614 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 PDPNQ86YL7 162 aa13□□□□□ -0.33
PTPN13-203ENST00000427191 ISLRO14498 428 aa12.99□□□□□ -0.33
PTPN13-203ENST00000427191 GLULP15104 373 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms