RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 CHATP28329 748 aa12.3□□□□□ -0.44
RPL28-202ENST00000426763 GSK3AP49840 483 aa12.3□□□□□ -0.44
RPL28-202ENST00000426763 SSX9Q7RTT3 188 aa12.3□□□□□ -0.44
RPL28-202ENST00000426763 LRRC29Q8WV35 223 aa12.3□□□□□ -0.44
RPL28-202ENST00000426763 PTP4A1Q93096 173 aa12.3□□□□□ -0.44
RPL28-202ENST00000426763 TAAR6Q96RI8 345 aa12.3□□□□□ -0.44
RPL28-202ENST00000426763 CREB3L2Q70SY1 520 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 SSX8Q7RTT4 187 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 ZDHHC16Q969W1 377 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 LAMP3Q9UQV4 416 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 UNC13CQ8NB66 2214 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 H3BMH7 237 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 RAB4BP61018 213 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 TLE4Q04727 773 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 DBPQ10586 325 aaPredicted RBP12.29□□□□□ -0.44
RPL28-202ENST00000426763 RHOUQ7L0Q8 258 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 NANPQ8TBE9 248 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 C16orf97H3BN30 126 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 DHODHQ02127 395 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 KHDC1LQ5JSQ8 128 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 TRMT61AQ96FX7 289 aaKnown RBP12.29□□□□□ -0.44
RPL28-202ENST00000426763 UHRF2Q96PU4 802 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 MRM2Q9UI43 246 aaKnown RBP12.29□□□□□ -0.44
RPL28-202ENST00000426763 HBE1P02100 147 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 COX6A1P12074 109 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 RAB6AP20340 208 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 THBS3P49746 956 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 OPCMLQ14982 345 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 INO80CQ6PI98 192 aaPredicted RBP12.29□□□□□ -0.44
RPL28-202ENST00000426763 SUMF2Q8NBJ7 301 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 OR8B12Q8NGG6 310 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 SLC7A6Q92536 515 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 SLC35E1Q96K37 410 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 GON7Q9BXV9 100 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 TMEM38BQ9NVV0 291 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 CENPVL1A0A0U1RR11 272 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 TUBAL3A6NHL2 446 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 NTN1O95631 604 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 ADRA2CP18825 462 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 OR2H1Q9GZK4 316 aa12.29□□□□□ -0.44
RPL28-202ENST00000426763 ANKRD33BA6NCL7 494 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 NGFP01138 241 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 OR8G2PQ6IF36 304 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 SMIM4Q8WVI0 70 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 RAB1CQ92928 201 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 COMMD5Q9GZQ3 224 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 HRH4Q9H3N8 390 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 ONECUT1Q9UBC0 465 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 A0A0J9YW62 118 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 ADH4P08319 380 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 GLI4P10075 376 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 MDH2P40926 338 aaKnown RBP12.28□□□□□ -0.44
RPL28-202ENST00000426763 CST9LP1Q5W188 147 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 APH1BQ8WW43 257 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 AUNIPQ9H7T9 357 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 SIX6O95475 246 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 CEACAM1P13688 526 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 TRAT1Q6PIZ9 186 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 TMEM229BQ8NBD8 167 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 CNTNAP3Q9BZ76 1288 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 NARFLQ9H6Q4 476 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 GNB4Q9HAV0 340 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 SERTAD4Q9NUC0 356 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 SLC39A9Q9NUM3 307 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 CCSO14618 274 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 FADS1O60427 444 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 HOXA6P31267 233 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 ZNF674Q2M3X9 581 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 TMEM268Q5VZI3 342 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 OR5D13Q8NGL4 314 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 OR13C8Q8NGS7 320 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 CACFD1Q9UGQ2 172 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 OSGIN2Q9Y236 505 aa12.28□□□□□ -0.44
RPL28-202ENST00000426763 PTPRFP10586 1907 aa12.27□□□□□ -0.44
RPL28-202ENST00000426763 C4orf51C9J302 202 aa12.27□□□□□ -0.44
RPL28-202ENST00000426763 LGALS8O00214 317 aa12.27□□□□□ -0.44
RPL28-202ENST00000426763 ACSM4P0C7M7 580 aa12.27□□□□□ -0.44
RPL28-202ENST00000426763 ZNF14P17017 642 aaPredicted RBP12.27□□□□□ -0.44
RPL28-202ENST00000426763 NHLRC1Q6VVB1 395 aa12.27□□□□□ -0.44
RPL28-202ENST00000426763 MAMSTRQ6ZN01 415 aa12.27□□□□□ -0.44
RPL28-202ENST00000426763 RNF150Q9ULK6 438 aa12.27□□□□□ -0.44
RPL28-202ENST00000426763 SCN3AQ9NY46 2000 aa12.27□□□□□ -0.44
RPL28-202ENST00000426763 ST8SIA5O15466 376 aa12.27□□□□□ -0.44
RPL28-202ENST00000426763 LRP3O75074 770 aa12.27□□□□□ -0.44
RPL28-202ENST00000426763 SCAND1P57086 179 aa12.27□□□□□ -0.44
RPL28-202ENST00000426763 NKX6-1P78426 367 aaPredicted RBP12.27□□□□□ -0.44
RPL28-202ENST00000426763 MRPS34P82930 218 aaKnown RBP12.27□□□□□ -0.44
RPL28-202ENST00000426763 PMP22Q01453 160 aa12.27□□□□□ -0.44
RPL28-202ENST00000426763 ZP4Q12836 540 aa12.27□□□□□ -0.44
RPL28-202ENST00000426763 MARCH1Q8TCQ1 289 aa12.27□□□□□ -0.44
RPL28-202ENST00000426763 HPSE2Q8WWQ2 592 aa12.27□□□□□ -0.44
RPL28-202ENST00000426763 DAZAP1Q96EP5 407 aaKnown RBP12.27□□□□□ -0.44
RPL28-202ENST00000426763 AGFG2O95081 481 aa12.27□□□□□ -0.45
RPL28-202ENST00000426763 TGM6O95932 706 aa12.27□□□□□ -0.45
RPL28-202ENST00000426763 CTSBP07858 339 aa12.27□□□□□ -0.45
RPL28-202ENST00000426763 ZFP36L2P47974 494 aaKnown RBP12.27□□□□□ -0.45
RPL28-202ENST00000426763 MMP15P51511 669 aa12.27□□□□□ -0.45
RPL28-202ENST00000426763 KRBOX4Q5JUW0 171 aa12.27□□□□□ -0.45
RPL28-202ENST00000426763 FOXJ2Q9P0K8 574 aa12.27□□□□□ -0.45
RPL28-202ENST00000426763 TIMM8BQ9Y5J9 83 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms