RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 IGLV3-1P01715 115 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 IGHA1P01876 353 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 IGHV4-38-2P0DP08 117 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 MYF6P23409 242 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 DDOSTP39656 456 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 PITPNBP48739 271 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 GNB2P62879 340 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 ACTC1P68032 377 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 ACTA1P68133 377 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 RAB40BQ12829 278 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 PRDX4Q13162 271 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 KLHL22Q53GT1 634 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 WDR82Q6UXN9 313 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 DCDC5Q6ZRR9 648 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 ZDHHC22Q8N966 263 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 OR5T2Q8NGG2 359 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 OR52H1Q8NGJ2 320 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 OR8S1Q8NH09 359 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 NANPQ8TBE9 248 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 LRRC29Q8WV35 223 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 RAB40AQ8WXH6 277 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 OR5P3Q8WZ94 311 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 TAF15Q92804 592 aaKnown RBP eCLIP10.59□□□□□ -0.71
GPC1-204ENST00000426280 RNF166Q96A37 237 aaPredicted RBP10.59□□□□□ -0.71
GPC1-204ENST00000426280 ALG8Q9BVK2 526 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 PBOV1Q9GZY1 135 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 WDR13Q9H1Z4 485 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 ISG20L2Q9H9L3 353 aaKnown RBP10.59□□□□□ -0.71
GPC1-204ENST00000426280 ACOXLQ9NUZ1 547 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 ERVK13-1Q9NX77 482 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 GNG8Q9UK08 70 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 GTF2A1LQ9UNN4 478 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 SLC22A13Q9Y226 551 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 LRCH1Q9Y2L9 728 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 PCDHGB1Q9Y5G3 927 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 R4GMQ9 66 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 IGHV2-70DA0A0C4DH43 119 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 KIR2DS1A0A191URI9 304 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 A0A1B0GTI1 187 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 OOEPA6NGQ2 149 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 A6NIN4 97 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 LOC110117498-PIK3R3F6TDL0 507 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 H3BSH0 61 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 J3QLW9 94 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 CST4P01036 141 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 TTRP02766 147 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 LIMS3P0CW19 117 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 LIMS4P0CW20 117 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 IRF2P14316 349 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 ZNF19P17023 458 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 GATA3P23771 443 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 DCTDP32321 178 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 ETV1P50549 477 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 GMFBP60983 142 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 GALEQ14376 348 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 SNCBQ16143 134 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 ZNF829Q3KNS6 432 aaPredicted RBP10.58□□□□□ -0.72
GPC1-204ENST00000426280 CDONQ4KMG0 1287 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 C6orf141Q5SZD1 244 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 C1orf87Q8N0U7 546 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 SIGLECL1Q8N7X8 197 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 SPERTQ8NA61 448 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 PLPP7Q8NBV4 271 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 OR51E1Q8TCB6 317 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 SGCDQ92629 289 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 RORBQ92753 470 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 FAM71F1Q96KD3 344 aaPredicted RBP10.58□□□□□ -0.72
GPC1-204ENST00000426280 C4orf36Q96KX1 117 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 CNBD2Q96M20 576 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 C1orf147Q96MC9 270 aaPredicted RBP10.58□□□□□ -0.72
GPC1-204ENST00000426280 CCL13Q99616 98 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 PAPOLGQ9BWT3 736 aaKnown RBP10.58□□□□□ -0.72
GPC1-204ENST00000426280 ANKRD60Q9BZ19 345 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 TLNRD1Q9H1K6 362 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 OPA3Q9H6K4 179 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 OR52A1Q9UKL2 312 aa10.58□□□□□ -0.72
GPC1-204ENST00000426280 hCG_1807616A0A1W2PRN6 198 aa10.57□□□□□ -0.72
GPC1-204ENST00000426280 ADAM20O43506 726 aa10.57□□□□□ -0.72
GPC1-204ENST00000426280 RHBDL1O75783 438 aa10.57□□□□□ -0.72
GPC1-204ENST00000426280 SULT1C4O75897 302 aa10.57□□□□□ -0.72
GPC1-204ENST00000426280 SELLP14151 372 aa10.57□□□□□ -0.72
GPC1-204ENST00000426280 HSPA13P48723 471 aa10.57□□□□□ -0.72
GPC1-204ENST00000426280 HILS1P60008 231 aa10.57□□□□□ -0.72
GPC1-204ENST00000426280 ST3GAL4Q11206 333 aa10.57□□□□□ -0.72
GPC1-204ENST00000426280 ODF4Q2M2E3 257 aa10.57□□□□□ -0.72
GPC1-204ENST00000426280 CEP78Q5JTW2 689 aa10.57□□□□□ -0.72
GPC1-204ENST00000426280 OR2G6Q5TZ20 316 aa10.57□□□□□ -0.72
GPC1-204ENST00000426280 TEX36Q5VZQ5 186 aa10.57□□□□□ -0.72
GPC1-204ENST00000426280 AHSA2Q719I0 299 aa10.57□□□□□ -0.72
GPC1-204ENST00000426280 KRT74Q7RTS7 529 aa10.57□□□□□ -0.72
GPC1-204ENST00000426280 PRSS35Q8N3Z0 413 aa10.57□□□□□ -0.72
GPC1-204ENST00000426280 SCCPDHQ8NBX0 429 aa10.57□□□□□ -0.72
GPC1-204ENST00000426280 OR8B3Q8NGG8 313 aa10.57□□□□□ -0.72
GPC1-204ENST00000426280 PELI1Q96FA3 418 aa10.57□□□□□ -0.72
GPC1-204ENST00000426280 RNF170Q96K19 258 aa10.57□□□□□ -0.72
GPC1-204ENST00000426280 DUX5Q96PT3 197 aa10.57□□□□□ -0.72
GPC1-204ENST00000426280 OR8B2Q96RD0 313 aa10.57□□□□□ -0.72
GPC1-204ENST00000426280 ZNF184Q99676 751 aaPredicted RBP10.57□□□□□ -0.72
GPC1-204ENST00000426280 NUDT16L1Q9BRJ7 211 aaKnown RBP10.57□□□□□ -0.72
GPC1-204ENST00000426280 RGCCQ9H4X1 137 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms