RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 MGMTP16455 207 aa22.89■■□□□ 1.25
LDB1-202ENST00000425280 UBE2NP61088 152 aaKnown RBP22.89■■□□□ 1.25
LDB1-202ENST00000425280 FAM189A2Q15884 450 aa22.89■■□□□ 1.25
LDB1-202ENST00000425280 ATAD3CQ5T2N8 411 aa22.89■■□□□ 1.25
LDB1-202ENST00000425280 PLCXD3Q63HM9 321 aa22.89■■□□□ 1.25
LDB1-202ENST00000425280 RTL6Q6ICC9 239 aa22.89■■□□□ 1.25
LDB1-202ENST00000425280 CCDC36Q8IYA8 594 aa22.89■■□□□ 1.25
LDB1-202ENST00000425280 GABRG1Q8N1C3 465 aa22.89■■□□□ 1.25
LDB1-202ENST00000425280 FAM89BQ8N5H3 189 aa22.89■■□□□ 1.25
LDB1-202ENST00000425280 TMEM229BQ8NBD8 167 aa22.89■■□□□ 1.25
LDB1-202ENST00000425280 OR8S1Q8NH09 359 aa22.89■■□□□ 1.25
LDB1-202ENST00000425280 FLVCR2Q9UPI3 526 aa22.89■■□□□ 1.25
LDB1-202ENST00000425280 ACACAQ13085 2346 aa22.88■■□□□ 1.25
LDB1-202ENST00000425280 A0A1W2PR80 420 aa22.88■■□□□ 1.25
LDB1-202ENST00000425280 C7orf66A4D0T2 115 aa22.88■■□□□ 1.25
LDB1-202ENST00000425280 TMEM225BP0DP42 221 aa22.88■■□□□ 1.25
LDB1-202ENST00000425280 ZNF14P17017 642 aaPredicted RBP22.88■■□□□ 1.25
LDB1-202ENST00000425280 COX5AP20674 150 aa22.88■■□□□ 1.25
LDB1-202ENST00000425280 SF3B4Q15427 424 aaKnown RBP eCLIP22.88■■□□□ 1.253e-8■■□□□ 11.5
LDB1-202ENST00000425280 TSC22D1Q15714 1073 aa22.88■■□□□ 1.25
LDB1-202ENST00000425280 PLAC9Q5JTB6 97 aa22.88■■□□□ 1.25
LDB1-202ENST00000425280 OR56B1Q8NGI3 324 aa22.88■■□□□ 1.25
LDB1-202ENST00000425280 TECTBQ96PL2 329 aa22.88■■□□□ 1.25
LDB1-202ENST00000425280 ELL3Q9HB65 397 aaPredicted RBP22.88■■□□□ 1.25
LDB1-202ENST00000425280 ZNF221Q9UK13 617 aa22.88■■□□□ 1.25
LDB1-202ENST00000425280 SLC7A11Q9UPY5 501 aa22.88■■□□□ 1.25
LDB1-202ENST00000425280 SVILO95425 2214 aa22.88■■□□□ 1.25
LDB1-202ENST00000425280 FUT6P51993 359 aa22.88■■□□□ 1.25
LDB1-202ENST00000425280 TMEM50BP56557 158 aa22.88■■□□□ 1.25
LDB1-202ENST00000425280 TAS2R19P59542 299 aa22.88■■□□□ 1.25
LDB1-202ENST00000425280 STEAP1BQ6NZ63 245 aa22.88■■□□□ 1.25
LDB1-202ENST00000425280 TRAPPC6BQ86SZ2 158 aa22.88■■□□□ 1.25
LDB1-202ENST00000425280 OR51T1Q8NGJ9 327 aa22.88■■□□□ 1.25
LDB1-202ENST00000425280 NUDCD2Q8WVJ2 157 aa22.88■■□□□ 1.25
LDB1-202ENST00000425280 EXTL1Q92935 676 aa22.88■■□□□ 1.25
LDB1-202ENST00000425280 RAB3CQ96E17 227 aa22.88■■□□□ 1.25
LDB1-202ENST00000425280 GHITMQ9H3K2 345 aa22.88■■□□□ 1.25
LDB1-202ENST00000425280 ANKRD11Q6UB99 2663 aaPredicted RBP22.87■■□□□ 1.25
LDB1-202ENST00000425280 ZNF850A8MQ14 1090 aa22.87■■□□□ 1.25
LDB1-202ENST00000425280 TPOP07202 933 aa22.87■■□□□ 1.25
LDB1-202ENST00000425280 PER3P56645 1201 aa22.87■■□□□ 1.25
LDB1-202ENST00000425280 FAM180AQ6UWF9 173 aa22.87■■□□□ 1.25
LDB1-202ENST00000425280 MYPOPQ86VE0 399 aaPredicted RBP22.87■■□□□ 1.25
LDB1-202ENST00000425280 STARD4Q96DR4 205 aa22.87■■□□□ 1.25
LDB1-202ENST00000425280 OR10A4Q9H209 315 aa22.87■■□□□ 1.25
LDB1-202ENST00000425280 CRIM1Q9NZV1 1036 aa22.87■■□□□ 1.25
LDB1-202ENST00000425280 ZNF107Q9UII5 783 aaPredicted RBP22.87■■□□□ 1.25
LDB1-202ENST00000425280 KCNK7Q9Y2U2 307 aa22.87■■□□□ 1.25
LDB1-202ENST00000425280 SPRY1O43609 319 aaPredicted RBP22.86■■□□□ 1.25
LDB1-202ENST00000425280 CELA3BP08861 270 aa22.86■■□□□ 1.25
LDB1-202ENST00000425280 HIST1H1DP16402 221 aaKnown RBP22.86■■□□□ 1.25
LDB1-202ENST00000425280 RRAS2P62070 204 aaPredicted RBP22.86■■□□□ 1.25
LDB1-202ENST00000425280 ZNF782Q6ZMW2 699 aaPredicted RBP22.86■■□□□ 1.25
LDB1-202ENST00000425280 TM2D1Q9BX74 207 aa22.86■■□□□ 1.25
LDB1-202ENST00000425280 GPR160Q9UJ42 338 aa22.86■■□□□ 1.25
LDB1-202ENST00000425280 FAM215AQ9Y5M1 114 aa22.86■■□□□ 1.25
LDB1-202ENST00000425280 ANGPTL7O43827 346 aa22.86■■□□□ 1.25
LDB1-202ENST00000425280 TOXO94900 526 aa22.86■■□□□ 1.25
LDB1-202ENST00000425280 NDUFB6O95139 128 aa22.86■■□□□ 1.25
LDB1-202ENST00000425280 CGAP01215 116 aa22.86■■□□□ 1.25
LDB1-202ENST00000425280 GSTP1P09211 210 aaKnown RBP22.86■■□□□ 1.25
LDB1-202ENST00000425280 ATP1B3P54709 279 aa22.86■■□□□ 1.25
LDB1-202ENST00000425280 KRTCAP3Q53RY4 240 aa22.86■■□□□ 1.25
LDB1-202ENST00000425280 RFPL4BQ6ZWI9 263 aa22.86■■□□□ 1.25
LDB1-202ENST00000425280 STEAP2Q8NFT2 490 aa22.86■■□□□ 1.25
LDB1-202ENST00000425280 WBP1Q96G27 269 aa22.86■■□□□ 1.25
LDB1-202ENST00000425280 METTL9Q9H1A3 318 aa22.86■■□□□ 1.25
LDB1-202ENST00000425280 FOXI3A8MTJ6 420 aaPredicted RBP22.85■■□□□ 1.25
LDB1-202ENST00000425280 RRP8O43159 456 aaKnown RBP22.85■■□□□ 1.25
LDB1-202ENST00000425280 SSX5O60225 188 aa22.85■■□□□ 1.25
LDB1-202ENST00000425280 WDR1O75083 606 aa22.85■■□□□ 1.25
LDB1-202ENST00000425280 PEX14O75381 377 aa22.85■■□□□ 1.25
LDB1-202ENST00000425280 CYB5AP00167 134 aa22.85■■□□□ 1.25
LDB1-202ENST00000425280 PLATP00750 562 aa22.85■■□□□ 1.25
LDB1-202ENST00000425280 RCVRNP35243 200 aa22.85■■□□□ 1.25
LDB1-202ENST00000425280 TBC1D28Q2M2D7 210 aa22.85■■□□□ 1.25
LDB1-202ENST00000425280 ASCL4Q6XD76 172 aa22.85■■□□□ 1.25
LDB1-202ENST00000425280 GIMAP1Q8WWP7 306 aa22.85■■□□□ 1.25
LDB1-202ENST00000425280 BOD1Q96IK1 185 aa22.85■■□□□ 1.25
LDB1-202ENST00000425280 PAPOLGQ9BWT3 736 aaKnown RBP22.85■■□□□ 1.25
LDB1-202ENST00000425280 OPA3Q9H6K4 179 aa22.85■■□□□ 1.25
LDB1-202ENST00000425280 PROCRQ9UNN8 238 aa22.85■■□□□ 1.25
LDB1-202ENST00000425280 BOD1L1Q8NFC6 3051 aa22.85■■□□□ 1.25
LDB1-202ENST00000425280 ARPC1BO15143 372 aaKnown RBP22.85■■□□□ 1.25
LDB1-202ENST00000425280 HOXB1P14653 301 aaPredicted RBP22.85■■□□□ 1.25
LDB1-202ENST00000425280 ZNF324BQ6AW86 544 aaPredicted RBP22.85■■□□□ 1.25
LDB1-202ENST00000425280 CD163Q86VB7 1156 aa22.85■■□□□ 1.25
LDB1-202ENST00000425280 ZNF610Q8N9Z0 462 aa22.85■■□□□ 1.25
LDB1-202ENST00000425280 C1orf162Q8NEQ5 155 aaPredicted RBP22.85■■□□□ 1.25
LDB1-202ENST00000425280 ARHGAP5-AS1Q96IT6 56 aa22.85■■□□□ 1.25
LDB1-202ENST00000425280 CYYR1Q96J86 154 aa22.85■■□□□ 1.25
LDB1-202ENST00000425280 BEX2Q9BXY8 128 aa22.85■■□□□ 1.25
LDB1-202ENST00000425280 OPN3Q9H1Y3 402 aaPredicted RBP22.85■■□□□ 1.25
LDB1-202ENST00000425280 OR51B6Q9H340 312 aa22.85■■□□□ 1.25
LDB1-202ENST00000425280 TP63Q9H3D4 680 aaPredicted RBP22.85■■□□□ 1.25
LDB1-202ENST00000425280 CEP295Q9C0D2 2601 aa22.84■■□□□ 1.25
LDB1-202ENST00000425280 IDH3GP51553 393 aaPredicted RBP22.84■■□□□ 1.25
LDB1-202ENST00000425280 C1orf185Q5T7R7 199 aa22.84■■□□□ 1.25
LDB1-202ENST00000425280 GVQW1Q8N7I0 195 aa22.84■■□□□ 1.25
LDB1-202ENST00000425280 OR51S1Q8NGJ8 323 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms