RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 SLC26A7Q8TE54 656 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 DCUN1D4Q92564 292 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 RPL3LQ92901 407 aaKnown RBP4.92□□□□□ -1.62
SDCBP-203ENST00000424270 SPTSSAQ969W0 71 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 VPS33AQ96AX1 596 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 RTL8AQ9BWD3 113 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 NDEL1Q9GZM8 345 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 CCDC134Q9H6E4 229 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 MEPEQ9NQ76 525 aaPredicted RBP4.92□□□□□ -1.62
SDCBP-203ENST00000424270 SIGLEC8Q9NYZ4 499 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 VSX1Q9NZR4 365 aaPredicted RBP4.92□□□□□ -1.62
SDCBP-203ENST00000424270 MED31Q9Y3C7 131 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 CEPT1Q9Y6K0 416 aa4.92□□□□□ -1.62
SDCBP-203ENST00000424270 PRSS29PA6NIE9 313 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 A8MZ25 164 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 M0R135 149 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 PSMD9O00233 223 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 CLIC1O00299 241 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 RRP9O43818 475 aaKnown RBP4.91□□□□□ -1.62
SDCBP-203ENST00000424270 HLA-DQA2P01906 255 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 AMY1AP04745 511 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 AMY2AP04746 511 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 ALDOCP09972 364 aaKnown RBP4.91□□□□□ -1.62
SDCBP-203ENST00000424270 OR8U9P0C7N5 309 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 ATF4P18848 351 aaPredicted RBP4.91□□□□□ -1.62
SDCBP-203ENST00000424270 VDAC1P21796 283 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 ALDH3A1P30838 453 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 CEACAM3P40198 252 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 ISL1P61371 349 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 FADDQ13158 208 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 FOXE3Q13461 319 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 SCARB2Q14108 478 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 RBM39Q14498 530 aaKnown RBP4.91□□□□□ -1.62
SDCBP-203ENST00000424270 HNF4GQ14541 408 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 TAF13Q15543 124 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 GFOD2Q3B7J2 385 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 SNAI3Q3KNW1 292 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 LDLRAD2Q5SZI1 272 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 LINC00346Q8IVM7 164 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 OR6T1Q8NGN1 323 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 LRRC8CQ8TDW0 803 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 TMEM255BQ8WV15 326 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 TMEM239Q8WW34 195 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 LZICQ8WZA0 190 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 ARPC1AQ92747 370 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 RNF183Q96D59 192 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 ZNF799Q96GE5 643 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 ZNF570Q96NI8 536 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 HIST1H2AAQ96QV6 131 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 FMO2Q99518 471 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 WFDC6Q9BQY6 131 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 CLEC7AQ9BXN2 247 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 ZDHHC18Q9NUE0 388 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 CHCHD3Q9NX63 227 aaKnown RBP4.91□□□□□ -1.62
SDCBP-203ENST00000424270 HERC1Q15751 4861 aa4.91□□□□□ -1.62
SDCBP-203ENST00000424270 DNAH10Q8IVF4 4471 aa4.9□□□□□ -1.62
SDCBP-203ENST00000424270 IGKV1D-17A0A075B6S4 117 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 TRAV27A0A087WT01 109 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 IGHV2-26A0A0B4J1V2 119 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 C17orf98A8MV24 154 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 LEUTXA8MZ59 168 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 TOR1AO14656 332 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 HSPA12AO43301 675 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 OR5F1O95221 314 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 IL6P05231 212 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 ELANEP08246 267 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 RBMY1A1P0DJD3 496 aaKnown RBP4.9□□□□□ -1.63
SDCBP-203ENST00000424270 ZNF728P0DKX0 622 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 PSG2P11465 335 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 IFI30P13284 250 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 TMEM11P17152 192 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 RHCEP18577 417 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 KRT4P19013 534 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 GCAP28676 217 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 DDOSTP39656 456 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 SLC9A3P48764 834 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 MXRA7P84157 204 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.9□□□□□ -1.63
SDCBP-203ENST00000424270 RFX4Q33E94 735 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 CCDC144NLQ6NUI1 221 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 ACSM6Q6P461 480 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 PGM2L1Q6PCE3 622 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 DNM1P34Q6PK57 102 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 CCDC80Q76M96 950 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 TRAPPC6BQ86SZ2 158 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 CATSPERDQ86XM0 798 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 CALHM1Q8IU99 346 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 RBM45Q8IUH3 476 aaKnown RBP4.9□□□□□ -1.63
SDCBP-203ENST00000424270 EGFL6Q8IUX8 553 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 C4orf33Q8N1A6 199 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 Q8N1Y9 231 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 FTMTQ8N4E7 242 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 ZNF561Q8N587 486 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 ASCC1Q8N9N2 400 aaKnown RBP4.9□□□□□ -1.63
SDCBP-203ENST00000424270 CYB561A3Q8NBI2 242 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 OR10Z1Q8NGY1 313 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 HRASLS5Q96KN8 279 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 ZNF714Q96N38 554 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 ELOVL1Q9BW60 279 aa4.9□□□□□ -1.63
SDCBP-203ENST00000424270 SYT4Q9H2B2 425 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms