RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 SLC7A10Q9NS82 523 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 PLEKHJ1Q9NW61 149 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 TRAV14DV4A0A0A6YYC5 116 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 MED19A0JLT2 244 aaPredicted RBP10.41□□□□□ -0.74
PTPRN-204ENST00000423636 OR14I1A6ND48 311 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 OR5H14A6NHG9 310 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 NGFP01138 241 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 FSTP19883 344 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 LYPD6Q86Y78 171 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 CPEB3Q8NE35 698 aaKnown RBP10.41□□□□□ -0.74
PTPRN-204ENST00000423636 SLC25A43Q8WUT9 341 aaPredicted RBP10.41□□□□□ -0.74
PTPRN-204ENST00000423636 CHMP1AQ9HD42 196 aaPredicted RBP10.41□□□□□ -0.74
PTPRN-204ENST00000423636 FAM86C1Q9NVL1 165 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 TAS2R8Q9NYW2 309 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 SPTBN4Q9H254 2564 aa10.41□□□□□ -0.74
PTPRN-204ENST00000423636 HPNP05981 417 aa10.4□□□□□ -0.74
PTPRN-204ENST00000423636 SFTPBP07988 381 aa10.4□□□□□ -0.74
PTPRN-204ENST00000423636 NPBWR2P48146 333 aa10.4□□□□□ -0.74
PTPRN-204ENST00000423636 ZNF84P51523 738 aa10.4□□□□□ -0.74
PTPRN-204ENST00000423636 LUMP51884 338 aaPredicted RBP10.4□□□□□ -0.74
PTPRN-204ENST00000423636 P2RX3P56373 397 aa10.4□□□□□ -0.74
PTPRN-204ENST00000423636 RAB14P61106 215 aa10.4□□□□□ -0.74
PTPRN-204ENST00000423636 OR1C1Q15619 314 aa10.4□□□□□ -0.74
PTPRN-204ENST00000423636 CRIP3Q6Q6R5 217 aa10.4□□□□□ -0.74
PTPRN-204ENST00000423636 MOB3CQ70IA8 216 aa10.4□□□□□ -0.74
PTPRN-204ENST00000423636 M1APQ8TC57 530 aa10.4□□□□□ -0.74
PTPRN-204ENST00000423636 CMTM3Q96MX0 182 aa10.4□□□□□ -0.74
PTPRN-204ENST00000423636 KIAA1549Q9HCM3 1950 aa10.4□□□□□ -0.74
PTPRN-204ENST00000423636 C5orf49A4QMS7 147 aa10.4□□□□□ -0.74
PTPRN-204ENST00000423636 DHRS7CA6NNS2 312 aa10.4□□□□□ -0.74
PTPRN-204ENST00000423636 GEMIN2O14893 280 aaKnown RBP10.4□□□□□ -0.74
PTPRN-204ENST00000423636 PRAF2O60831 178 aa10.4□□□□□ -0.74
PTPRN-204ENST00000423636 PABPC1L2AQ5JQF8 200 aa10.4□□□□□ -0.74
PTPRN-204ENST00000423636 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.4□□□□□ -0.74
PTPRN-204ENST00000423636 FAM109AQ8N4B1 249 aa10.4□□□□□ -0.74
PTPRN-204ENST00000423636 FOXB1Q99853 325 aa10.4□□□□□ -0.74
PTPRN-204ENST00000423636 NAA11Q9BSU3 229 aaPredicted RBP10.4□□□□□ -0.74
PTPRN-204ENST00000423636 ZNF471Q9BX82 626 aaPredicted RBP10.4□□□□□ -0.74
PTPRN-204ENST00000423636 OR10A2Q9H208 303 aa10.4□□□□□ -0.74
PTPRN-204ENST00000423636 NOSIPQ9Y314 301 aaKnown RBP10.4□□□□□ -0.74
PTPRN-204ENST00000423636 SPTAN1Q13813 2472 aaKnown RBP10.4□□□□□ -0.74
PTPRN-204ENST00000423636 IGLV3-32A0A0A0MS00 114 aa10.4□□□□□ -0.75
PTPRN-204ENST00000423636 DISC1C4P0D8 188 aa10.4□□□□□ -0.75
PTPRN-204ENST00000423636 F8VVB4 439 aa10.4□□□□□ -0.75
PTPRN-204ENST00000423636 F8VWA3 439 aa10.4□□□□□ -0.75
PTPRN-204ENST00000423636 NEURL1O76050 574 aa10.4□□□□□ -0.75
PTPRN-204ENST00000423636 PMS2P2O95744 297 aa10.4□□□□□ -0.75
PTPRN-204ENST00000423636 SCGB1D2O95969 90 aa10.4□□□□□ -0.75
PTPRN-204ENST00000423636 SERPINA5P05154 406 aa10.4□□□□□ -0.75
PTPRN-204ENST00000423636 HIST1H1DP16402 221 aaKnown RBP10.4□□□□□ -0.75
PTPRN-204ENST00000423636 SERPINF1P36955 418 aa10.4□□□□□ -0.75
PTPRN-204ENST00000423636 CASRP41180 1078 aa10.4□□□□□ -0.75
PTPRN-204ENST00000423636 S100A10P60903 97 aa10.4□□□□□ -0.75
PTPRN-204ENST00000423636 HIST3H3Q16695 136 aa10.4□□□□□ -0.75
PTPRN-204ENST00000423636 DEGS2Q6QHC5 323 aa10.4□□□□□ -0.75
PTPRN-204ENST00000423636 ZNF767PQ75MW2 155 aa10.4□□□□□ -0.75
PTPRN-204ENST00000423636 NKAIN3Q8N8D7 197 aa10.4□□□□□ -0.75
PTPRN-204ENST00000423636 TMEM229BQ8NBD8 167 aa10.4□□□□□ -0.75
PTPRN-204ENST00000423636 RNF138Q8WVD3 245 aa10.4□□□□□ -0.75
PTPRN-204ENST00000423636 GPR160Q9UJ42 338 aa10.4□□□□□ -0.75
PTPRN-204ENST00000423636 IGF2RP11717 2491 aa10.39□□□□□ -0.75
PTPRN-204ENST00000423636 RPS10-NUDT3A0A1W2PQS6 291 aa10.39□□□□□ -0.75
PTPRN-204ENST00000423636 ZNF850A8MQ14 1090 aa10.39□□□□□ -0.75
PTPRN-204ENST00000423636 TMEM14DPA8MWL7 114 aa10.39□□□□□ -0.75
PTPRN-204ENST00000423636 CSTBP04080 98 aaKnown RBP10.39□□□□□ -0.75
PTPRN-204ENST00000423636 CD59P13987 128 aa10.39□□□□□ -0.75
PTPRN-204ENST00000423636 S100A11P31949 105 aa10.39□□□□□ -0.75
PTPRN-204ENST00000423636 PHLDA2Q53GA4 152 aa10.39□□□□□ -0.75
PTPRN-204ENST00000423636 DOK3Q7L591 496 aa10.39□□□□□ -0.75
PTPRN-204ENST00000423636 NARS2Q96I59 477 aaKnown RBP10.39□□□□□ -0.75
PTPRN-204ENST00000423636 MRI1Q9BV20 369 aa10.39□□□□□ -0.75
PTPRN-204ENST00000423636 MAB21L2Q9Y586 359 aa10.39□□□□□ -0.75
PTPRN-204ENST00000423636 LILRA1O75019 489 aa10.39□□□□□ -0.75
PTPRN-204ENST00000423636 MRPL33O75394 65 aaKnown RBP10.39□□□□□ -0.75
PTPRN-204ENST00000423636 GIPP09681 153 aaPredicted RBP10.39□□□□□ -0.75
PTPRN-204ENST00000423636 RAC3P60763 192 aa10.39□□□□□ -0.75
PTPRN-204ENST00000423636 RAP2BP61225 183 aa10.39□□□□□ -0.75
PTPRN-204ENST00000423636 ARF1P84077 181 aaKnown RBP10.39□□□□□ -0.75
PTPRN-204ENST00000423636 RSU1Q15404 277 aa10.39□□□□□ -0.75
PTPRN-204ENST00000423636 HIKESHIQ53FT3 197 aa10.39□□□□□ -0.75
PTPRN-204ENST00000423636 CALHM1Q8IU99 346 aa10.39□□□□□ -0.75
PTPRN-204ENST00000423636 OIT3Q8WWZ8 545 aa10.39□□□□□ -0.75
PTPRN-204ENST00000423636 EDEM2Q9BV94 578 aa10.39□□□□□ -0.75
PTPRN-204ENST00000423636 SMIM3Q9BZL3 60 aa10.39□□□□□ -0.75
PTPRN-204ENST00000423636 LDAHQ9H6V9 325 aa10.39□□□□□ -0.75
PTPRN-204ENST00000423636 MBD2Q9UBB5 411 aa10.39□□□□□ -0.75
PTPRN-204ENST00000423636 C9orf170A2RU37 121 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 NKX2-8O15522 239 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 DHRS3O75911 302 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 ASCL1P50553 236 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 CCL11P51671 97 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 FBXL14Q8N1E6 418 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 OR51F2Q8NH61 342 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 OR2V1Q8NHB1 315 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 PNPLA2Q96AD5 504 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 ESRP2Q9H6T0 727 aaKnown RBP10.38□□□□□ -0.75
PTPRN-204ENST00000423636 METTL8Q9H825 291 aaKnown RBP10.38□□□□□ -0.75
PTPRN-204ENST00000423636 A0A0B4J2A0 478 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 ZNF716A6NP11 495 aa10.38□□□□□ -0.75
PTPRN-204ENST00000423636 BPNT1O95861 308 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms