RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 FABP6P51161 128 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 BLVRAP53004 296 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 CDH11P55287 796 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 ACTR3P61158 418 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 LSM6P62312 80 aaKnown RBP2.11□□□□□ -2.07
VPS13A-208ENST00000423463 HSF2Q03933 536 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 FMODQ06828 376 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 SCRN3Q0VDG4 424 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 PPP1R8Q12972 351 aaKnown RBP2.11□□□□□ -2.07
VPS13A-208ENST00000423463 ATP6AP1Q15904 470 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 MESTQ5EB52 335 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 SHEQ5VZ18 495 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 ZFP1Q6P2D0 407 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 SHQ1Q6PI26 577 aaKnown RBP2.11□□□□□ -2.07
VPS13A-208ENST00000423463 SPNS3Q6ZMD2 512 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 RBPMS2Q6ZRY4 209 aaKnown RBP2.11□□□□□ -2.07
VPS13A-208ENST00000423463 KCTD8Q6ZWB6 473 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 TMEM179BQ7Z7N9 219 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 HIPK1Q86Z02 1210 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 C1orf174Q8IYL3 243 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 SVOPLQ8N434 492 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 NUP37Q8NFH4 326 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 KBTBD8Q8NFY9 601 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 OR2T33Q8NG76 320 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 OR9Q2Q8NGE9 314 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 OR52E2Q8NGJ4 325 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 OR4K13Q8NH42 304 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 FGFBP3Q8TAT2 258 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 NABP1Q96AH0 204 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 RASD2Q96D21 266 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 RAB3IPQ96QF0 476 aaPredicted RBP2.11□□□□□ -2.07
VPS13A-208ENST00000423463 CCL19Q99731 98 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 SH3GL3Q99963 347 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 TRAF4Q9BUZ4 470 aaPredicted RBP2.11□□□□□ -2.07
VPS13A-208ENST00000423463 OSBPL10Q9BXB5 764 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 EGLN3Q9H6Z9 239 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 ZNF442Q9H7R0 627 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 CHMP1AQ9HD42 196 aaPredicted RBP2.11□□□□□ -2.07
VPS13A-208ENST00000423463 CCNB1IP1Q9NPC3 277 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 POLE4Q9NR33 117 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 TUBG2Q9NRH3 451 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 CBLN4Q9NTU7 201 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 ZNF701Q9NV72 531 aaPredicted RBP2.11□□□□□ -2.07
VPS13A-208ENST00000423463 VNN3Q9NY84 501 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 IL20RAQ9UHF4 553 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 KLHL21Q9UJP4 597 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 B9D1Q9UPM9 204 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 FKBP7Q9Y680 259 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 U3KQV3 271 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 ANKHD1Q8IWZ3 2542 aaKnown RBP2.11□□□□□ -2.07
VPS13A-208ENST00000423463 ASH1LQ9NR48 2969 aaKnown RBP2.1□□□□□ -2.07
VPS13A-208ENST00000423463 IGLV1-36A0A0B4J1U3 117 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 H7C1C5 153 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 BHLHE40O14503 412 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 SNAP29O95721 258 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 IFNGP01579 166 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 SOD3P08294 240 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 PATE4P0C8F1 98 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 HIST1H1CP16403 213 aaKnown RBP2.1□□□□□ -2.07
VPS13A-208ENST00000423463 CTLA4P16410 223 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 ZNF32P17041 273 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 PRKACGP22612 351 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 CALCRP30988 508 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 APLNRP35414 380 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 GLRXP35754 106 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 EVX1P49640 407 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 GDI2P50395 445 aaKnown RBP2.1□□□□□ -2.07
VPS13A-208ENST00000423463 SLC25A1P53007 311 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 CRISP1P54107 249 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 RPS23P62266 143 aaKnown RBP2.1□□□□□ -2.07
VPS13A-208ENST00000423463 LCN6P62502 163 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 ESRRGP62508 458 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 HIST1H3AP68431 136 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 PPP2R2BQ00005 443 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 CDK5Q00535 292 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 PSG4Q00888 419 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 GALK2Q01415 458 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 GLO1Q04760 184 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 NPRL3Q12980 569 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 ENDOGQ14249 297 aaKnown RBP2.1□□□□□ -2.07
VPS13A-208ENST00000423463 GINS1Q14691 196 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 SNAPC1Q16533 368 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 MOGQ16653 247 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 TBC1D28Q2M2D7 210 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 PGGHGQ32M88 737 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 PABPC1L2AQ5JQF8 200 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 HIST2H3PS2Q5TEC6 136 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 FAHD1Q6P587 224 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 LEG1Q6P5S2 330 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 B3GLCTQ6Y288 498 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 HIST2H3AQ71DI3 136 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 OR6V1Q8N148 313 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 MUC15Q8N387 334 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 PARP8Q8N3A8 854 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 LRRC18Q8N456 261 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 NPEPL1Q8NDH3 523 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 SLC30A7Q8NEW0 376 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 OR8D4Q8NGM9 314 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 OR2T4Q8NH00 348 aa2.1□□□□□ -2.07
VPS13A-208ENST00000423463 OR52I2Q8NH67 350 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms