RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 MAGEA5P43359 124 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 FUT6P51993 359 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 ARFRP1Q13795 201 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 PLAC9Q5JTB6 97 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 ZSCAN4Q8NAM6 433 aaPredicted RBP12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 OR5H2Q8NGV7 314 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 APH1AQ96BI3 265 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 ZNF837Q96EG3 531 aaPredicted RBP12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 Q96M66 194 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 NKX3-1Q99801 234 aaPredicted RBP12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SOX7Q9BT81 388 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 HEXA-AS1Q9H8Q6 139 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 KCNN3Q9UGI6 736 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SHPKQ9UHJ6 478 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 VPS13AQ96RL7 3174 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 GPR179Q6PRD1 2367 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 PCNX2A6NKB5 2137 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 A0A0A6YYD4 124 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 RFPL4AA6NLU0 287 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 CDRT15L2A8MXV6 281 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 E9PLN8 166 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 RFPL4AL1F8VTS6 287 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 DBHP09172 617 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 ZBTB25P24278 435 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 NTF4P34130 210 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 MEOX1P50221 254 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 ATP1B3P54709 279 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 MTCP1P56278 107 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 H2BFSP57053 126 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 RAB14P61106 215 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 ZNF345Q14585 488 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SLC10A1Q14973 349 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 TMEM128Q5BJH2 165 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 TMEM65Q6PI78 240 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 TMED4Q7Z7H5 227 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 MCEMP1Q8IX19 187 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SUMF1Q8NBK3 374 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 TMEM185AQ8NFB2 350 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 NANOS1Q8WY41 292 aaKnown RBP12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 PIGTQ969N2 578 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 FBXW5Q969U6 566 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 CMBLQ96DG6 245 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 ZNF845Q96IR2 970 aaPredicted RBP12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SPACA5Q96QH8 159 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 PRRG4Q9BZD6 226 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 GLRX2Q9NS18 164 aa12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 MYEF2Q9P2K5 600 aaKnown RBP12.68□□□□□ -0.38
HLA-DPA1-242ENST00000419277 FAM90A10PA6NDY2 464 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 FAM90A18PA6NE21 464 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 FAM90A16PA6NEW6 464 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 FAM90A20PA6NIJ5 464 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 FAM90A8PA6NJQ4 464 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 FAM90A7PA6NKC0 464 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 FAM90A22PA8MWA6 464 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 FAM90A12PA8MX19 464 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 FAM90A5PA8MXJ8 464 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 FAM90A23PA8MXZ1 464 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SOCS1O15524 211 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 RRP8O43159 456 aaKnown RBP12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 NOS1APO75052 506 aaPredicted RBP12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 NRASP01111 189 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 FAM90A15PP0C7V4 464 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 FAM90A13PP0C7W8 464 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 FAM90A14PP0C7W9 464 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 FAM90A24PP0C7X0 464 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 DTYMKP23919 212 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 S100A11P31949 105 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 TMEM50BP56557 158 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 CYCSP99999 105 aaKnown RBP12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 GRK1Q15835 563 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 CLLU1Q5K131 121 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 TSPO2Q5TGU0 170 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 CRIP3Q6Q6R5 217 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 PEG10Q86TG7 708 aaKnown RBP12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 OR4S1Q8NGB4 309 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 OR52B4Q8NGK2 314 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 ELMOD3Q96FG2 381 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 ARHGAP5-AS1Q96IT6 56 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 DHRS9Q9BPW9 319 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 CHIAQ9BZP6 476 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 COMMD9Q9P000 198 aa12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 NOP16Q9Y3C1 178 aaKnown RBP12.67□□□□□ -0.38
HLA-DPA1-242ENST00000419277 CNTRLQ7Z7A1 2325 aa12.66□□□□□ -0.38
HLA-DPA1-242ENST00000419277 RP2O75695 350 aa12.66□□□□□ -0.38
HLA-DPA1-242ENST00000419277 TOXO94900 526 aa12.66□□□□□ -0.38
HLA-DPA1-242ENST00000419277 ZNF35P13682 527 aa12.66□□□□□ -0.38
HLA-DPA1-242ENST00000419277 PPP3CBP16298 524 aa12.66□□□□□ -0.38
HLA-DPA1-242ENST00000419277 AMY2BP19961 511 aa12.66□□□□□ -0.38
HLA-DPA1-242ENST00000419277 BLVRBP30043 206 aaPredicted RBP12.66□□□□□ -0.38
HLA-DPA1-242ENST00000419277 IL13RA1P78552 427 aa12.66□□□□□ -0.38
HLA-DPA1-242ENST00000419277 MALLQ13021 153 aa12.66□□□□□ -0.38
HLA-DPA1-242ENST00000419277 RSU1Q15404 277 aa12.66□□□□□ -0.38
HLA-DPA1-242ENST00000419277 LINC00696Q6ZRV3 163 aa12.66□□□□□ -0.38
HLA-DPA1-242ENST00000419277 LHFPL1Q86WI0 220 aa12.66□□□□□ -0.38
HLA-DPA1-242ENST00000419277 SKA3Q8IX90 412 aa12.66□□□□□ -0.38
HLA-DPA1-242ENST00000419277 CSNK2A3Q8NEV1 391 aa12.66□□□□□ -0.38
HLA-DPA1-242ENST00000419277 MARVELD3Q96A59 401 aa12.66□□□□□ -0.38
HLA-DPA1-242ENST00000419277 APOBEC3DQ96AK3 386 aaPredicted RBP12.66□□□□□ -0.38
HLA-DPA1-242ENST00000419277 BANF2Q9H503 90 aa12.66□□□□□ -0.38
HLA-DPA1-242ENST00000419277 IL17BQ9UHF5 180 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms