RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 CXCL3P19876 107 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 CPT2P23786 658 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 EIF2S3P41091 472 aaKnown RBP7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 RBP2P50120 134 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 FUT6P51993 359 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 GNG2P59768 71 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 ACTBL2Q562R1 376 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 TFAP2EQ6VUC0 442 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 CCDC36Q8IYA8 594 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 ZDHHC22Q8N966 263 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 CHST4Q8NCG5 386 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 Q8NFD4 153 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 OR13C8Q8NGS7 320 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 NUDCD2Q8WVJ2 157 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 NANOS1Q8WY41 292 aaKnown RBP7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 SNAPC3Q92966 411 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 MS4A3Q96HJ5 214 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 HYLS1Q96M11 299 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 SLC6A7Q99884 636 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 PRRT1Q99946 306 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 GAL3ST1Q99999 423 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 SELENOIQ9C0D9 397 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 TINAGL1Q9GZM7 467 aaPredicted RBP7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 KCNN3Q9UGI6 736 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 PRSS50Q9UI38 385 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 SCP2D1Q9UJQ7 156 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 ITGB1BP2Q9UKP3 347 aa7.84□□□□□ -1.15
LINCMD1-201ENST00000418518 FREM2Q5SZK8 3169 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 A0A096LPE4 126 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 A0A1W2PPZ6 126 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 M0QYG6 137 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 FABP7O15540 132 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 EFSO43281 561 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 ZNF780AO75290 641 aaPredicted RBP7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 RAD51DO75771 328 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 OR2A4O95047 310 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 CST4P01036 141 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 AMY2AP04746 511 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 GIPP09681 153 aaPredicted RBP7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 HOXB1P14653 301 aaPredicted RBP7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 ANXA7P20073 488 aaKnown RBP7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 COX5AP20674 150 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 MTCP1P56278 107 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 RAB1AP62820 205 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 MRPS15P82914 257 aaKnown RBP7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 GK2Q14410 553 aaPredicted RBP7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 ZNF169Q14929 603 aaPredicted RBP7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 RSPO4Q2I0M5 234 aaPredicted RBP7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 SLC22A6Q4U2R8 563 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 RNASE10Q5GAN6 216 aaKnown RBP7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 VAX1Q5SQQ9 334 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 NSUN5P2Q63ZY6 315 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 LAMTOR1Q6IAA8 161 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 Q6ZS92 163 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 FAM214BQ7L5A3 538 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 ASCL5Q7RTU5 278 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 RTN4RL2Q86UN3 420 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 BPIFB2Q8N4F0 458 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 ZSCAN4Q8NAM6 433 aaPredicted RBP7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 CSNK2A3Q8NEV1 391 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 BEST4Q8NFU0 473 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 NPRL2Q8WTW4 380 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 CCDC107Q8WV48 283 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 ASB13Q8WXK3 278 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 DVL3Q92997 716 aaPredicted RBP7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 WNT2BQ93097 391 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 SARAFQ96BY9 339 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 MRPS24Q96EL2 167 aaKnown RBP7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 BORCS8Q96FH0 119 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 ARHGAP5-AS1Q96IT6 56 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 OR2A7Q96R45 310 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 SEC22CQ9BRL7 303 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 COL25A1Q9BXS0 654 aaPredicted RBP7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 PECRQ9BY49 303 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 METTL9Q9H1A3 318 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 BANF2Q9H503 90 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 RANBP3Q9H6Z4 567 aaPredicted RBP7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 ZMAT3Q9HA38 289 aaKnown RBP7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 IFT46Q9NQC8 304 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 DLL4Q9NR61 685 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 HSF4Q9ULV5 492 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 PLEKHA6Q9Y2H5 1048 aa7.83□□□□□ -1.16
LINCMD1-201ENST00000418518 SVILO95425 2214 aa7.82□□□□□ -1.16
LINCMD1-201ENST00000418518 TMEM82A0PJX8 343 aa7.82□□□□□ -1.16
LINCMD1-201ENST00000418518 FIGNL2A6NMB9 653 aa7.82□□□□□ -1.16
LINCMD1-201ENST00000418518 G3V3Q6 166 aa7.82□□□□□ -1.16
LINCMD1-201ENST00000418518 H3BUI4 141 aa7.82□□□□□ -1.16
LINCMD1-201ENST00000418518 SSNA1O43805 119 aa7.82□□□□□ -1.16
LINCMD1-201ENST00000418518 SERPINA2P20848 420 aa7.82□□□□□ -1.16
LINCMD1-201ENST00000418518 SDHBP21912 280 aa7.82□□□□□ -1.16
LINCMD1-201ENST00000418518 PMELP40967 661 aa7.82□□□□□ -1.16
LINCMD1-201ENST00000418518 WNT5AP41221 380 aa7.82□□□□□ -1.16
LINCMD1-201ENST00000418518 ATP1B3P54709 279 aa7.82□□□□□ -1.16
LINCMD1-201ENST00000418518 DHODHQ02127 395 aa7.82□□□□□ -1.16
LINCMD1-201ENST00000418518 PLP2Q04941 152 aa7.82□□□□□ -1.16
LINCMD1-201ENST00000418518 MALLQ13021 153 aa7.82□□□□□ -1.16
LINCMD1-201ENST00000418518 MPPED2Q15777 294 aa7.82□□□□□ -1.16
LINCMD1-201ENST00000418518 ATPAF1Q5TC12 328 aaPredicted RBP7.82□□□□□ -1.16
LINCMD1-201ENST00000418518 C9orf135Q5VTT2 229 aa7.82□□□□□ -1.16
LINCMD1-201ENST00000418518 RPUSD3Q6P087 351 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms