RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 HPSE2Q8WWQ2 592 aa19.42■□□□□ 0.7
SMARCB1-205ENST00000417137 GATAD2BQ8WXI9 593 aa19.42■□□□□ 0.7
SMARCB1-205ENST00000417137 TECTBQ96PL2 329 aa19.42■□□□□ 0.7
SMARCB1-205ENST00000417137 RASSF4Q9H2L5 321 aa19.42■□□□□ 0.7
SMARCB1-205ENST00000417137 ZNF665Q9H7R5 613 aa19.42■□□□□ 0.7
SMARCB1-205ENST00000417137 TRIM36Q9NQ86 728 aa19.42■□□□□ 0.7
SMARCB1-205ENST00000417137 ANKRD61A6NGH8 418 aa19.41■□□□□ 0.7
SMARCB1-205ENST00000417137 ZNF732B4DXR9 585 aa19.41■□□□□ 0.7
SMARCB1-205ENST00000417137 H3BSH0 61 aa19.41■□□□□ 0.7
SMARCB1-205ENST00000417137 MYL12BO14950 172 aa19.41■□□□□ 0.7
SMARCB1-205ENST00000417137 GATBO75879 557 aaKnown RBP19.41■□□□□ 0.7
SMARCB1-205ENST00000417137 CDK1P06493 297 aa19.41■□□□□ 0.7
SMARCB1-205ENST00000417137 C21orf33P30042 268 aaPredicted RBP19.41■□□□□ 0.7
SMARCB1-205ENST00000417137 THBS2P35442 1172 aa19.41■□□□□ 0.7
SMARCB1-205ENST00000417137 GPM6AP51674 278 aa19.41■□□□□ 0.7
SMARCB1-205ENST00000417137 ZMYND11Q15326 602 aa19.41■□□□□ 0.7
SMARCB1-205ENST00000417137 KCNJ8Q15842 424 aa19.41■□□□□ 0.7
SMARCB1-205ENST00000417137 WDR86Q86TI4 376 aa19.41■□□□□ 0.7
SMARCB1-205ENST00000417137 LINC01356Q8N9X3 169 aa19.41■□□□□ 0.7
SMARCB1-205ENST00000417137 PP6455Q8WZ26 134 aa19.41■□□□□ 0.7
SMARCB1-205ENST00000417137 C1orf159Q96HA4 380 aa19.41■□□□□ 0.7
SMARCB1-205ENST00000417137 TLNRD1Q9H1K6 362 aa19.41■□□□□ 0.7
SMARCB1-205ENST00000417137 GPR173Q9NS66 373 aa19.41■□□□□ 0.7
SMARCB1-205ENST00000417137 UBAP1Q9NZ09 502 aa19.41■□□□□ 0.7
SMARCB1-205ENST00000417137 SLC7A11Q9UPY5 501 aa19.41■□□□□ 0.7
SMARCB1-205ENST00000417137 DYSFO75923 2080 aa19.4■□□□□ 0.7
SMARCB1-205ENST00000417137 ZNF469Q96JG9 3925 aaPredicted RBP19.4■□□□□ 0.7
SMARCB1-205ENST00000417137 A6NIN4 97 aa19.4■□□□□ 0.7
SMARCB1-205ENST00000417137 B4DSR2 109 aa19.4■□□□□ 0.7
SMARCB1-205ENST00000417137 CDIPTO14735 213 aa19.4■□□□□ 0.7
SMARCB1-205ENST00000417137 ZFPL1O95159 310 aa19.4■□□□□ 0.7
SMARCB1-205ENST00000417137 ZNF20P17024 532 aa19.4■□□□□ 0.7
SMARCB1-205ENST00000417137 CPT2P23786 658 aa19.4■□□□□ 0.7
SMARCB1-205ENST00000417137 IL2RGP31785 369 aa19.4■□□□□ 0.7
SMARCB1-205ENST00000417137 CFHR2P36980 270 aa19.4■□□□□ 0.7
SMARCB1-205ENST00000417137 GTF2A1P52655 376 aaPredicted RBP19.4■□□□□ 0.7
SMARCB1-205ENST00000417137 RNLSQ5VYX0 342 aa19.4■□□□□ 0.7
SMARCB1-205ENST00000417137 ZNF826PQ6ZT77 177 aa19.4■□□□□ 0.7
SMARCB1-205ENST00000417137 C11orf53Q8IXP5 236 aa19.4■□□□□ 0.7
SMARCB1-205ENST00000417137 OR13C3Q8NGS6 347 aa19.4■□□□□ 0.7
SMARCB1-205ENST00000417137 TMEM165Q9HC07 324 aa19.4■□□□□ 0.7
SMARCB1-205ENST00000417137 PCDHGB5Q9Y5G0 923 aa19.4■□□□□ 0.7
SMARCB1-205ENST00000417137 IGHV2-5P01817 119 aa19.39■□□□□ 0.69
SMARCB1-205ENST00000417137 TAS2R43P59537 309 aa19.39■□□□□ 0.69
SMARCB1-205ENST00000417137 KRTAP1-1Q07627 177 aa19.39■□□□□ 0.69
SMARCB1-205ENST00000417137 HNRNPA0Q13151 305 aaKnown RBP19.39■□□□□ 0.69
SMARCB1-205ENST00000417137 BOLLQ8N9W6 283 aaKnown RBP19.39■□□□□ 0.69
SMARCB1-205ENST00000417137 SCCPDHQ8NBX0 429 aa19.39■□□□□ 0.69
SMARCB1-205ENST00000417137 FGGYQ96C11 551 aa19.39■□□□□ 0.69
SMARCB1-205ENST00000417137 MSI2Q96DH6 328 aaKnown RBP19.39■□□□□ 0.69
SMARCB1-205ENST00000417137 CHST5Q9GZS9 411 aa19.39■□□□□ 0.69
SMARCB1-205ENST00000417137 OR51I2Q9H344 312 aa19.39■□□□□ 0.69
SMARCB1-205ENST00000417137 YAE1D1Q9NRH1 226 aa19.39■□□□□ 0.69
SMARCB1-205ENST00000417137 NIPBLQ6KC79 2804 aaeCLIP19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 LGALS8O00214 317 aa19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 OGG1O15527 345 aa19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 ZNF205O95201 554 aa19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 TGFAP01135 160 aa19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 LHBP01229 141 aa19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 RBMXP38159 391 aaKnown RBP19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 WNT4P56705 351 aa19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 CDK5R1Q15078 307 aa19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 RBM48Q5RL73 367 aaKnown RBP19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 WDR82Q6UXN9 313 aa19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 Q71RC1 249 aaPredicted RBP19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 ZNF573Q86YE8 665 aa19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 NANOGP1Q8N7R0 232 aa19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 OR10Z1Q8NGY1 313 aa19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 ZNF671Q8TAW3 534 aa19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 LRRC29Q8WV35 223 aa19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 RPL3LQ92901 407 aaKnown RBP19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 PDCD1LG2Q9BQ51 273 aa19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 CDCA4Q9BXL8 241 aa19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 FGF23Q9GZV9 251 aaPredicted RBP19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 PATZ1Q9HBE1 687 aaKnown RBP19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 ERVK-18Q9QC07 812 aa19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 MIOXQ9UGB7 285 aa19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 BLOC1S6Q9UL45 172 aa19.38■□□□□ 0.69
SMARCB1-205ENST00000417137 TANC2Q9HCD6 1990 aa19.37■□□□□ 0.69
SMARCB1-205ENST00000417137 TRAV38-1A0A0B4J264 116 aa19.37■□□□□ 0.69
SMARCB1-205ENST00000417137 DENRO43583 198 aaKnown RBP19.37■□□□□ 0.69
SMARCB1-205ENST00000417137 LMX1BO60663 402 aa19.37■□□□□ 0.69
SMARCB1-205ENST00000417137 SLC35A2P78381 396 aa19.37■□□□□ 0.69
SMARCB1-205ENST00000417137 CNN3Q15417 329 aaKnown RBP19.37■□□□□ 0.69
SMARCB1-205ENST00000417137 ZNF404Q494X3 552 aa19.37■□□□□ 0.69
SMARCB1-205ENST00000417137 FAM201AQ5SY85 155 aa19.37■□□□□ 0.69
SMARCB1-205ENST00000417137 FAM166AQ6J272 317 aa19.37■□□□□ 0.69
SMARCB1-205ENST00000417137 GCSAMQ8N6F7 178 aa19.37■□□□□ 0.69
SMARCB1-205ENST00000417137 MND1Q9BWT6 205 aa19.37■□□□□ 0.69
SMARCB1-205ENST00000417137 DUSP21Q9H596 190 aa19.37■□□□□ 0.69
SMARCB1-205ENST00000417137 NEK6Q9HC98 313 aa19.37■□□□□ 0.69
SMARCB1-205ENST00000417137 DHDHQ9UQ10 334 aa19.37■□□□□ 0.69
SMARCB1-205ENST00000417137 CR1P17927 2039 aa19.37■□□□□ 0.69
SMARCB1-205ENST00000417137 PQLC2LA1A4F0 135 aa19.36■□□□□ 0.69
SMARCB1-205ENST00000417137 OOEPA6NGQ2 149 aa19.36■□□□□ 0.69
SMARCB1-205ENST00000417137 A8MV72 311 aaPredicted RBP19.36■□□□□ 0.69
SMARCB1-205ENST00000417137 NDUFA2O43678 99 aa19.36■□□□□ 0.69
SMARCB1-205ENST00000417137 CRHBPP24387 322 aa19.36■□□□□ 0.69
SMARCB1-205ENST00000417137 FUT6P51993 359 aa19.36■□□□□ 0.69
SMARCB1-205ENST00000417137 UBE2V2Q15819 145 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms