RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 SLC35E4Q6ICL7 350 aa12.11□□□□□ -0.47
RPS28-201ENST00000417088 LCN8Q6JVE9 175 aa12.11□□□□□ -0.47
RPS28-201ENST00000417088 KCTD8Q6ZWB6 473 aa12.11□□□□□ -0.47
RPS28-201ENST00000417088 PIGWQ7Z7B1 504 aa12.11□□□□□ -0.47
RPS28-201ENST00000417088 OR5R1Q8NH85 324 aa12.11□□□□□ -0.47
RPS28-201ENST00000417088 THEM6Q8WUY1 208 aa12.11□□□□□ -0.47
RPS28-201ENST00000417088 DUS3LQ96G46 650 aaKnown RBP12.11□□□□□ -0.47
RPS28-201ENST00000417088 FEVQ99581 238 aa12.11□□□□□ -0.47
RPS28-201ENST00000417088 PPA2Q9H2U2 334 aa12.11□□□□□ -0.47
RPS28-201ENST00000417088 METTL8Q9H825 291 aaKnown RBP12.11□□□□□ -0.47
RPS28-201ENST00000417088 NLKQ9UBE8 527 aa12.11□□□□□ -0.47
RPS28-201ENST00000417088 A0A1W2PQ09 198 aa12.1□□□□□ -0.47
RPS28-201ENST00000417088 ANKRD61A6NGH8 418 aa12.1□□□□□ -0.47
RPS28-201ENST00000417088 OR2AT4A6NND4 320 aa12.1□□□□□ -0.47
RPS28-201ENST00000417088 H3BN98 237 aa12.1□□□□□ -0.47
RPS28-201ENST00000417088 DCTN3O75935 186 aa12.1□□□□□ -0.47
RPS28-201ENST00000417088 NDUFB7P17568 137 aa12.1□□□□□ -0.47
RPS28-201ENST00000417088 C2orf68Q2NKX9 166 aa12.1□□□□□ -0.47
RPS28-201ENST00000417088 FAM98BQ52LJ0 330 aaKnown RBP12.1□□□□□ -0.47
RPS28-201ENST00000417088 NCR3LG1Q68D85 454 aa12.1□□□□□ -0.47
RPS28-201ENST00000417088 HCP5Q6MZN7 132 aa12.1□□□□□ -0.47
RPS28-201ENST00000417088 PLBD1Q6P4A8 553 aa12.1□□□□□ -0.47
RPS28-201ENST00000417088 DHFR2Q86XF0 187 aa12.1□□□□□ -0.47
RPS28-201ENST00000417088 ZDHHC23Q8IYP9 409 aa12.1□□□□□ -0.47
RPS28-201ENST00000417088 ZNF454Q8N9F8 522 aa12.1□□□□□ -0.47
RPS28-201ENST00000417088 OR8B12Q8NGG6 310 aa12.1□□□□□ -0.47
RPS28-201ENST00000417088 GIPC3Q8TF64 312 aa12.1□□□□□ -0.47
RPS28-201ENST00000417088 C17orf50Q8WW18 174 aa12.1□□□□□ -0.47
RPS28-201ENST00000417088 MUC13Q9H3R2 512 aa12.1□□□□□ -0.47
RPS28-201ENST00000417088 ELL3Q9HB65 397 aaPredicted RBP12.1□□□□□ -0.47
RPS28-201ENST00000417088 FBLN5Q9UBX5 448 aa12.1□□□□□ -0.47
RPS28-201ENST00000417088 KLHDC2Q9Y2U9 406 aa12.1□□□□□ -0.47
RPS28-201ENST00000417088 IGKV1D-17A0A075B6S4 117 aa12.09□□□□□ -0.47
RPS28-201ENST00000417088 B2RBV5 119 aa12.09□□□□□ -0.47
RPS28-201ENST00000417088 PRR23D1E9PI22 279 aaPredicted RBP12.09□□□□□ -0.47
RPS28-201ENST00000417088 RHBDL1O75783 438 aa12.09□□□□□ -0.47
RPS28-201ENST00000417088 PRR23D2P0DMB1 279 aaPredicted RBP12.09□□□□□ -0.47
RPS28-201ENST00000417088 PAICSP22234 425 aaKnown RBP12.09□□□□□ -0.47
RPS28-201ENST00000417088 GLRA1P23415 457 aa12.09□□□□□ -0.47
RPS28-201ENST00000417088 POU1F1P28069 291 aa12.09□□□□□ -0.47
RPS28-201ENST00000417088 GABRA2P47869 451 aa12.09□□□□□ -0.47
RPS28-201ENST00000417088 GPM6AP51674 278 aa12.09□□□□□ -0.47
RPS28-201ENST00000417088 MNAT1P51948 309 aa12.09□□□□□ -0.47
RPS28-201ENST00000417088 PSMA6P60900 246 aaKnown RBP12.09□□□□□ -0.47
RPS28-201ENST00000417088 TRIM25Q14258 630 aaKnown RBP12.09□□□□□ -0.47
RPS28-201ENST00000417088 KRT74Q7RTS7 529 aa12.09□□□□□ -0.47
RPS28-201ENST00000417088 ZNRF1Q8ND25 227 aa12.09□□□□□ -0.47
RPS28-201ENST00000417088 BEND2Q8NDZ0 799 aa12.09□□□□□ -0.47
RPS28-201ENST00000417088 PPP1R35Q8TAP8 253 aa12.09□□□□□ -0.47
RPS28-201ENST00000417088 AJUBAQ96IF1 538 aa12.09□□□□□ -0.47
RPS28-201ENST00000417088 HIST1H2AAQ96QV6 131 aa12.09□□□□□ -0.47
RPS28-201ENST00000417088 OR51I2Q9H344 312 aa12.09□□□□□ -0.47
RPS28-201ENST00000417088 TAS2R1Q9NYW7 299 aa12.09□□□□□ -0.47
RPS28-201ENST00000417088 ZNF222Q9UK12 451 aa12.09□□□□□ -0.47
RPS28-201ENST00000417088 SIGLEC9Q9Y336 463 aa12.09□□□□□ -0.47
RPS28-201ENST00000417088 MAB21L2Q9Y586 359 aa12.09□□□□□ -0.47
RPS28-201ENST00000417088 H3BUX3 64 aa12.08□□□□□ -0.48
RPS28-201ENST00000417088 CSF1P09603 554 aa12.08□□□□□ -0.48
RPS28-201ENST00000417088 PSG2P11465 335 aa12.08□□□□□ -0.48
RPS28-201ENST00000417088 GABRA5P31644 462 aa12.08□□□□□ -0.48
RPS28-201ENST00000417088 BLMHQ13867 455 aa12.08□□□□□ -0.48
RPS28-201ENST00000417088 GK3PQ14409 553 aa12.08□□□□□ -0.48
RPS28-201ENST00000417088 GINS1Q14691 196 aa12.08□□□□□ -0.48
RPS28-201ENST00000417088 TMEM179BQ7Z7N9 219 aa12.08□□□□□ -0.48
RPS28-201ENST00000417088 ARHGAP24Q8N264 748 aa12.08□□□□□ -0.48
RPS28-201ENST00000417088 PAPD5Q8NDF8 572 aaKnown RBP12.08□□□□□ -0.48
RPS28-201ENST00000417088 SSX3Q99909 188 aa12.08□□□□□ -0.48
RPS28-201ENST00000417088 NIPAL2Q9H841 368 aa12.08□□□□□ -0.48
RPS28-201ENST00000417088 SF3B6Q9Y3B4 125 aaKnown RBP12.08□□□□□ -0.48
RPS28-201ENST00000417088 LRP12Q9Y561 859 aa12.08□□□□□ -0.48
RPS28-201ENST00000417088 TRBV23-1A0A0A0MS06 115 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 ARRDC5A6NEK1 342 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 ZNF732B4DXR9 585 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 H0YAE9 185 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 PRODHO43272 600 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 ATP8B1O43520 1251 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 CST1P01037 141 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 RAP2AP10114 183 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 ALOX5APP20292 161 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 MAP2K3P46734 347 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 EFNB2P52799 333 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 GYS2P54840 703 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 GNGT1P63211 74 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 GNG3P63215 75 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 HERPUD1Q15011 391 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 CEACAM21Q3KPI0 293 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 DMRTC1Q5HYR2 192 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 CEP78Q5JTW2 689 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 KRT77Q7Z794 578 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 CPOQ8IVL8 374 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 FAM185AQ8N0U4 392 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 TMEM185AQ8NFB2 350 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 OR5D13Q8NGL4 314 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 FAM81AQ8TBF8 368 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 AQP3Q92482 292 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 RORBQ92753 470 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 SDSLQ96GA7 329 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 MEGF9Q9H1U4 602 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 YY1AP1Q9H869 796 aa12.07□□□□□ -0.48
RPS28-201ENST00000417088 TET2Q6N021 2002 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms