RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 VMO1Q7Z5L0 202 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 ZDHHC23Q8IYP9 409 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 Q8N7P7 452 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 OR10Z1Q8NGY1 313 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 ANGPTL6Q8NI99 470 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 DNAJC9Q8WXX5 260 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 C12orf43Q96C57 262 aaKnown RBP12.43□□□□□ -0.42
UBXN4-203ENST00000416538 RNF170Q96K19 258 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 PBOV1Q9GZY1 135 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 GABARAPL1Q9H0R8 117 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 ELL3Q9HB65 397 aaPredicted RBP12.43□□□□□ -0.42
UBXN4-203ENST00000416538 ADGRL4Q9HBW9 690 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 SIRT7Q9NRC8 400 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 HAO2Q9NYQ3 351 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 ZNF222Q9UK12 451 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 A0A0U1RQK1 487 aa12.42□□□□□ -0.42
UBXN4-203ENST00000416538 ZNF816-ZNF321PA0A0X1KG74 233 aa12.42□□□□□ -0.42
UBXN4-203ENST00000416538 TMEM269A0A1B0GVZ9 245 aa12.42□□□□□ -0.42
UBXN4-203ENST00000416538 FAM181BA6NEQ2 426 aa12.42□□□□□ -0.42
UBXN4-203ENST00000416538 LIPFP07098 398 aa12.42□□□□□ -0.42
UBXN4-203ENST00000416538 FAHP16930 419 aa12.42□□□□□ -0.42
UBXN4-203ENST00000416538 SRSF4Q08170 494 aaKnown RBP12.42□□□□□ -0.42
UBXN4-203ENST00000416538 KLRD1Q13241 179 aa12.42□□□□□ -0.42
UBXN4-203ENST00000416538 ATPAF1Q5TC12 328 aaPredicted RBP12.42□□□□□ -0.42
UBXN4-203ENST00000416538 KDM4DQ6B0I6 523 aa12.42□□□□□ -0.42
UBXN4-203ENST00000416538 KCTD8Q6ZWB6 473 aa12.42□□□□□ -0.42
UBXN4-203ENST00000416538 SSX6Q7RTT6 188 aa12.42□□□□□ -0.42
UBXN4-203ENST00000416538 AMIGO2Q86SJ2 522 aa12.42□□□□□ -0.42
UBXN4-203ENST00000416538 FTMTQ8N4E7 242 aa12.42□□□□□ -0.42
UBXN4-203ENST00000416538 TCEANCQ8N8B7 351 aa12.42□□□□□ -0.42
UBXN4-203ENST00000416538 C8orf46Q8TAG6 207 aa12.42□□□□□ -0.42
UBXN4-203ENST00000416538 OR51E1Q8TCB6 317 aa12.42□□□□□ -0.42
UBXN4-203ENST00000416538 TMIGD2Q96BF3 282 aa12.42□□□□□ -0.42
UBXN4-203ENST00000416538 FAM71F1Q96KD3 344 aaPredicted RBP12.42□□□□□ -0.42
UBXN4-203ENST00000416538 CNN2Q99439 309 aaKnown RBP12.42□□□□□ -0.42
UBXN4-203ENST00000416538 DCTN5Q9BTE1 182 aa12.42□□□□□ -0.42
UBXN4-203ENST00000416538 OR51I2Q9H344 312 aa12.42□□□□□ -0.42
UBXN4-203ENST00000416538 GPR84Q9NQS5 396 aa12.42□□□□□ -0.42
UBXN4-203ENST00000416538 ACOXLQ9NUZ1 547 aa12.42□□□□□ -0.42
UBXN4-203ENST00000416538 NUFIP1Q9UHK0 495 aaKnown RBP12.42□□□□□ -0.42
UBXN4-203ENST00000416538 IGKV1D-17A0A075B6S4 117 aa12.41□□□□□ -0.42
UBXN4-203ENST00000416538 RNASEK-C17orf49H0YIS7 233 aa12.41□□□□□ -0.42
UBXN4-203ENST00000416538 ECDO95905 644 aaPredicted RBP12.41□□□□□ -0.42
UBXN4-203ENST00000416538 ESRRGP62508 458 aa12.41□□□□□ -0.42
UBXN4-203ENST00000416538 IL13RA1P78552 427 aa12.41□□□□□ -0.42
UBXN4-203ENST00000416538 CDONQ4KMG0 1287 aa12.41□□□□□ -0.42
UBXN4-203ENST00000416538 LCN1P1Q5VSP4 162 aa12.41□□□□□ -0.42
UBXN4-203ENST00000416538 DEGS2Q6QHC5 323 aa12.41□□□□□ -0.42
UBXN4-203ENST00000416538 FIP1L1Q6UN15 594 aaKnown RBP12.41□□□□□ -0.42
UBXN4-203ENST00000416538 SHISA2Q6UWI4 295 aa12.41□□□□□ -0.42
UBXN4-203ENST00000416538 SLC36A1Q7Z2H8 476 aa12.41□□□□□ -0.42
UBXN4-203ENST00000416538 ZNF679Q8IYX0 411 aa12.41□□□□□ -0.42
UBXN4-203ENST00000416538 PNKDQ8N490 385 aa12.41□□□□□ -0.42
UBXN4-203ENST00000416538 SGMS2Q8NHU3 365 aa12.41□□□□□ -0.42
UBXN4-203ENST00000416538 GATAD2BQ8WXI9 593 aa12.41□□□□□ -0.42
UBXN4-203ENST00000416538 APOL4Q9BPW4 351 aa12.41□□□□□ -0.42
UBXN4-203ENST00000416538 KRT84Q9NSB2 600 aa12.41□□□□□ -0.42
UBXN4-203ENST00000416538 C1RLQ9NZP8 487 aa12.41□□□□□ -0.42
UBXN4-203ENST00000416538 ONECUT1Q9UBC0 465 aa12.41□□□□□ -0.42
UBXN4-203ENST00000416538 MRM2Q9UI43 246 aaKnown RBP12.41□□□□□ -0.42
UBXN4-203ENST00000416538 ZNF391Q9UJN7 358 aa12.41□□□□□ -0.42
UBXN4-203ENST00000416538 KPTNQ9Y664 436 aa12.41□□□□□ -0.42
UBXN4-203ENST00000416538 CMYA5Q8N3K9 4069 aa12.41□□□□□ -0.42
UBXN4-203ENST00000416538 A0A1B0GTI1 187 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 ZNF732B4DXR9 585 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 IGHV4-59P01825 116 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 POLR2IP36954 125 aaKnown RBP12.4□□□□□ -0.42
UBXN4-203ENST00000416538 MAP2K3P46734 347 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 BPIFB3P59826 476 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 CXCR4P61073 352 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 PDCD1Q15116 288 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 SNCBQ16143 134 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 C11orf91Q3C1V1 193 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 PRR31Q5SQ13 230 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 KCTD18Q6PI47 426 aaPredicted RBP12.4□□□□□ -0.42
UBXN4-203ENST00000416538 ZNF322Q6U7Q0 402 aaPredicted RBP12.4□□□□□ -0.42
UBXN4-203ENST00000416538 MEPCEQ7L2J0 689 aaKnown RBP12.4□□□□□ -0.42
UBXN4-203ENST00000416538 LDLRAD3Q86YD5 345 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 SLC35F2Q8IXU6 374 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 FAM81AQ8TBF8 368 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 TMEM163Q8TC26 289 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 WFDC12Q8WWY7 111 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 LRTOMTQ8WZ04 291 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 AQP3Q92482 292 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 TNFRSF14Q92956 283 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 ZNF488Q96MN9 340 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 IL4I1Q96RQ9 567 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 CIB1Q99828 191 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 MROQ9BYG7 248 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 CNTD2Q9H8S5 307 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 ABCB9Q9NP78 766 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 NOX4Q9NPH5 578 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 NLKQ9UBE8 527 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 DNAJB11Q9UBS4 358 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 IKZF2Q9UKS7 526 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 MAB21L2Q9Y586 359 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 MEGF8Q7Z7M0 2845 aa12.4□□□□□ -0.42
UBXN4-203ENST00000416538 A0A1B0GVI7 797 aa12.39□□□□□ -0.43
UBXN4-203ENST00000416538 NKX6-3A6NJ46 265 aa12.39□□□□□ -0.43
UBXN4-203ENST00000416538 ACOD1A6NK06 481 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms