RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 MYO7BQ6PIF6 2116 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 PQLC2LA1A4F0 135 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 MBTPS2O43462 519 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 TLX3O43711 291 aaPredicted RBP8.62□□□□□ -1.03
CD44-206ENST00000415148 LRP3O75074 770 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 SERPINA5P05154 406 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 SFTA3P0C7M3 94 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 THBS4P35443 961 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 ZNF84P51523 738 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 CAV2P51636 162 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 F2RL1P55085 397 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 HGFACQ04756 655 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 SPEM2Q0P670 501 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 RAB32Q13637 225 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 AVPI1Q5T686 147 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 CDCP2Q5VXM1 449 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 CLEC9AQ6UXN8 241 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 SLC16A14Q7RTX9 510 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 OR51T1Q8NGJ9 327 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 SLC25A43Q8WUT9 341 aaPredicted RBP8.62□□□□□ -1.03
CD44-206ENST00000415148 C10orf35Q96D05 121 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 CLCC1Q96S66 551 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 NAA11Q9BSU3 229 aaPredicted RBP8.62□□□□□ -1.03
CD44-206ENST00000415148 TM2D1Q9BX74 207 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 ZNF319Q9P2F9 582 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 HDGFL3Q9Y3E1 203 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 A0A0U1RQV5 110 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 PMS2P1A4D2B8 440 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 ZNF726A6NNF4 738 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 SHISA8B8ZZ34 492 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 PRSS44E7EML9 344 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 SDCBPO00560 298 aaPredicted RBP8.61□□□□□ -1.03
CD44-206ENST00000415148 RRP8O43159 456 aaKnown RBP8.61□□□□□ -1.03
CD44-206ENST00000415148 HTR3BO95264 441 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 QDPRP09417 244 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 SLC2A1P11166 492 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 RPS2P15880 293 aaKnown RBP8.61□□□□□ -1.03
CD44-206ENST00000415148 PTGDSP41222 190 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 SNU13P55769 128 aaKnown RBP8.61□□□□□ -1.03
CD44-206ENST00000415148 CSNK2A1P68400 391 aaPredicted RBP8.61□□□□□ -1.03
CD44-206ENST00000415148 SMAD4Q13485 552 aaKnown RBP8.61□□□□□ -1.03
CD44-206ENST00000415148 OR2A2Q6IF42 318 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.61□□□□□ -1.03
CD44-206ENST00000415148 ZNF283Q8N7M2 679 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 CSNK2A3Q8NEV1 391 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 FAM71F1Q96KD3 344 aaPredicted RBP8.61□□□□□ -1.03
CD44-206ENST00000415148 LMAN1LQ9HAT1 526 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 C1orf123Q9NWV4 160 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 ASH2LQ9UBL3 628 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 FER1L5A0AVI2 2057 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 IGKV1-9A0A0C4DH69 117 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 TRBV11-1A0A0K0K1C0 115 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 C5orf63A6NC05 138 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 FAM157AC9JC47 383 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 ZFAND5O76080 213 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 CST4P01036 141 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 DAOP14920 347 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 ZNF43P17038 809 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 GLRA1P23415 457 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 CDAP32320 146 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 EIF1P41567 113 aaKnown RBP8.61□□□□□ -1.03
CD44-206ENST00000415148 DHPSP49366 369 aaPredicted RBP8.61□□□□□ -1.03
CD44-206ENST00000415148 MFAP5Q13361 173 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 KISS1Q15726 138 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 SHISA6Q6ZSJ9 500 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 FAM57BQ71RH2 274 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 SKA3Q8IX90 412 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 OR2M3Q8NG83 312 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 THAP3Q8WTV1 239 aaPredicted RBP8.61□□□□□ -1.03
CD44-206ENST00000415148 PP6455Q8WZ26 134 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 BSCL2Q96G97 398 aaPredicted RBP8.61□□□□□ -1.03
CD44-206ENST00000415148 ST6GALNAC5Q9BVH7 336 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 PECRQ9BY49 303 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 C14orf166Q9Y224 244 aaKnown RBP8.61□□□□□ -1.03
CD44-206ENST00000415148 V9GYS6 101 aa8.61□□□□□ -1.03
CD44-206ENST00000415148 AQP7P3A6NL99 342 aa8.6□□□□□ -1.03
CD44-206ENST00000415148 RNASEK-C17orf49H0YIS7 233 aa8.6□□□□□ -1.03
CD44-206ENST00000415148 RER1O15258 196 aa8.6□□□□□ -1.03
CD44-206ENST00000415148 FBXO24O75426 580 aa8.6□□□□□ -1.03
CD44-206ENST00000415148 ONECUT2O95948 504 aa8.6□□□□□ -1.03
CD44-206ENST00000415148 IFNA2P01563 188 aa8.6□□□□□ -1.03
CD44-206ENST00000415148 CD80P33681 288 aa8.6□□□□□ -1.03
CD44-206ENST00000415148 SULT1A2P50226 295 aa8.6□□□□□ -1.03
CD44-206ENST00000415148 SLC35A1P78382 337 aa8.6□□□□□ -1.03
CD44-206ENST00000415148 ACY1Q03154 408 aa8.6□□□□□ -1.03
CD44-206ENST00000415148 RSPO4Q2I0M5 234 aaPredicted RBP8.6□□□□□ -1.03
CD44-206ENST00000415148 CHRFAM7AQ494W8 412 aa8.6□□□□□ -1.03
CD44-206ENST00000415148 DHRS11Q6UWP2 260 aa8.6□□□□□ -1.03
CD44-206ENST00000415148 DTX1Q86Y01 620 aa8.6□□□□□ -1.03
CD44-206ENST00000415148 SLC22A8Q8TCC7 542 aa8.6□□□□□ -1.03
CD44-206ENST00000415148 OR5B2Q96R09 309 aa8.6□□□□□ -1.03
CD44-206ENST00000415148 CNTNAP3Q9BZ76 1288 aa8.6□□□□□ -1.03
CD44-206ENST00000415148 METTL7AQ9H8H3 244 aa8.6□□□□□ -1.03
CD44-206ENST00000415148 TAF9BQ9HBM6 251 aa8.6□□□□□ -1.03
CD44-206ENST00000415148 DECR2Q9NUI1 292 aa8.6□□□□□ -1.03
CD44-206ENST00000415148 EHFQ9NZC4 300 aa8.6□□□□□ -1.03
CD44-206ENST00000415148 GSKIPQ9P0R6 139 aa8.6□□□□□ -1.03
CD44-206ENST00000415148 MYOTQ9UBF9 498 aa8.6□□□□□ -1.03
CD44-206ENST00000415148 EDARQ9UNE0 448 aa8.6□□□□□ -1.03
CD44-206ENST00000415148 ADAMTS20P59510 1910 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms