RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 HEATR5BQ9P2D3 2071 aa2.19□□□□□ -2.06
HMGB1P11-201ENST00000413899 MN1Q10571 1320 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 REV3LO60673 3130 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 EXPH5Q8NEV8 1989 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 CHD9Q3L8U1 2897 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 MDC1Q14676 2089 aaKnown RBP2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 A0A0G2JND7 137 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 C5orf67F2Z3F1 127 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 NIPSNAP2O75323 286 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 CLDN11O75508 207 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 KLHL2O95198 593 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 TMEM50AO95807 157 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 CTSLP07711 333 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 SERPINA6P08185 405 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 CISD3P0C7P0 127 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 TLX1NBP0CAT3 122 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 TROVE2P10155 538 aaKnown RBP eCLIP2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 RALBP11234 206 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 KITLGP21583 273 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 CD9P21926 228 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 GABRR2P28476 465 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 OR1E1P30953 314 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 ATP5C1P36542 298 aaKnown RBP2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 CRYBB2P43320 205 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 RAP1GDS1P52306 607 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 AQP5P55064 265 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 FOXA1P55317 472 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 DNAJB13P59910 316 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 SARNPP82979 210 aaKnown RBP2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 STX3Q13277 289 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 PRPSAP1Q14558 356 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 ZNF235Q14590 738 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 TAF1AQ15573 450 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 CCDC153Q494R4 210 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 C5orf47Q569G3 176 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 XKR7Q5GH72 579 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 FAM45BPQ6NSW5 357 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 C22orf39Q6P5X5 142 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 DUX4L9Q6RFH8 374 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 EPGNQ6UW88 154 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 SBSNQ6UWP8 590 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 TPGS1Q6ZTW0 290 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 ZNF695Q8IW36 515 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 SNX31Q8N9S9 440 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 DNAAF3Q8N9W5 541 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 OR1L6Q8NGR2 347 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 OR6K2Q8NGY2 324 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 OR2G2Q8NGZ5 317 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 FAM45AQ8TCE6 357 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 CDKL2Q92772 493 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 STMN2Q93045 179 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 TMEM54Q969K7 222 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 CNDP1Q96KN2 507 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 BMFQ96LC9 184 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 PPP1R2P1Q96PQ5 205 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 LYSMD1Q96S90 227 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 PAIP2Q9BPZ3 127 aaKnown RBP2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 CHAC1Q9BUX1 264 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 MRPL37Q9BZE1 423 aaKnown RBP2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 IQCGQ9H095 443 aaKnown RBP2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 POMKQ9H5K3 350 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 POPDC3Q9HBV1 291 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 INPP5EQ9NRR6 644 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 TAS2R1Q9NYW7 299 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 SLC7A8Q9UHI5 535 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 RPL26L1Q9UNX3 145 aaKnown RBP2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 HS3ST2Q9Y278 367 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 IKBKGQ9Y6K9 419 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 MYO7AQ13402 2215 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 CHD7Q9P2D1 2997 aa2.18□□□□□ -2.06
HMGB1P11-201ENST00000413899 KCNE1BA0A087WTH5 132 aa2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 IGHV5-51A0A0C4DH38 117 aa2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 A0A0J9YYE9 177 aa2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 CXorf51AA0A1B0GTR3 108 aa2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 IQCF5A8MTL0 148 aa2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 C10orf142B7Z368 130 aa2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 UBXN8O00124 270 aa2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 AP3B1O00203 1094 aa2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 CDC7O00311 574 aa2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 FOXE1O00358 373 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 CCL16O15467 120 aa2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 SOX15O60248 233 aa2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 OR1I1O60431 355 aa2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 KLHL41O60662 606 aa2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 ENTPD5O75356 428 aa2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 EIF3GO75821 320 aaKnown RBP eCLIP2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 CDK14O94921 469 aa2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 SOD1P00441 154 aa2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 TRBC1P01850 177 aa2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 RPS3P23396 243 aaKnown RBP eCLIP2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 PSMD8P48556 350 aa2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 MRPL19P49406 292 aaKnown RBP2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 TUFMP49411 452 aaKnown RBP2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 CCNHP51946 323 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 CCNG1P51959 295 aa2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 AP1S1P61966 158 aa2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 SEMG2Q02383 582 aa2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 C18orf21Q32NC0 220 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 LINC00483Q53H64 154 aa2.17□□□□□ -2.06
HMGB1P11-201ENST00000413899 FBXO48Q5FWF7 155 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms