RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 FBLN5Q9UBX5 448 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 SLC7A11Q9UPY5 501 aa5.7□□□□□ -1.5
VPS41-204ENST00000413141 RELNP78509 3460 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 A0A0G2JMP0 313 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 A0A0X1KG70 313 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 PQLC2LA1A4F0 135 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 FABP12A6NFH5 140 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 TMEM14DPA8MWL7 114 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 B8ZZF3 427 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 ABCD4O14678 606 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 CTAG2O75638 210 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 UPK1BO75841 260 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 PRB1P04280 392 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 UBBP0CG47 229 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 VSIG8P0DPA2 414 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 NAT2P11245 290 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 RAB6AP20340 208 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 KITLGP21583 273 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 CA6P23280 308 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 GRNP28799 593 aaKnown RBP5.69□□□□□ -1.5
VPS41-204ENST00000413141 GCH1P30793 250 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 GLRXP35754 106 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 PTGFRP43088 359 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 ALDH3B1P43353 468 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 NR4A2P43354 598 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 RANBP1P43487 201 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 RBP2P50120 134 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 MMP15P51511 669 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 FUT6P51993 359 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 ART1P52961 327 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 ATP1B3P54709 279 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 MTCP1P56278 107 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 RPS23P62266 143 aaKnown RBP5.69□□□□□ -1.5
VPS41-204ENST00000413141 QRFPP83859 136 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 BSPH1Q075Z2 132 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 TFF3Q07654 80 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 PSG7Q13046 419 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 MSMPQ1L6U9 139 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 C2orf76Q3KRA6 126 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 ALKBH6Q3KRA9 238 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 ZNF718Q3SXZ3 478 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 OR10K2Q6IF99 312 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 RGS7BPQ6MZT1 257 aaPredicted RBP5.69□□□□□ -1.5
VPS41-204ENST00000413141 C16orf87Q6PH81 154 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 XKRXQ6PP77 449 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 BAIAP2L2Q6UXY1 529 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 OR2W3Q7Z3T1 314 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 BIVMQ86UB2 503 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 ANGPTL5Q86XS5 388 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 SNX29P2Q8IUI4 249 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 CMTM4Q8IZR5 234 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 NUP37Q8NFH4 326 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 OR4M2Q8NGB6 313 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 ITLN2Q8WWU7 325 aaPredicted RBP5.69□□□□□ -1.5
VPS41-204ENST00000413141 OR5P3Q8WZ94 311 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 WFIKKN1Q96NZ8 548 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 ADAT1Q9BUB4 502 aaKnown RBP5.69□□□□□ -1.5
VPS41-204ENST00000413141 CCDC32Q9BV29 185 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 KCNJ16Q9NPI9 418 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 GHRLQ9UBU3 117 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 PURGQ9UJV8 347 aaKnown RBP5.69□□□□□ -1.5
VPS41-204ENST00000413141 SPEF1Q9Y4P9 236 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 MPC1Q9Y5U8 109 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 EPG5Q9HCE0 2579 aa5.69□□□□□ -1.5
VPS41-204ENST00000413141 IGLV3-9A0A075B6K5 115 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 DPRXA6NFQ7 191 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 OR5B21A6NL26 309 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 TIMM8AO60220 97 aaPredicted RBP5.68□□□□□ -1.5
VPS41-204ENST00000413141 CDC14BO60729 498 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 ZG16O60844 167 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 C1QL1O75973 258 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 KDM4BO94953 1096 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 CLDN14O95500 239 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 PLATP00750 562 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 ZNF250P15622 560 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 AGAP20933 346 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 CDK2P24941 298 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 MNDAP41218 407 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 PITPNBP48739 271 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 FABP6P51161 128 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 GPM6AP51674 278 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 TAS2R20P59543 309 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 IFITM3Q01628 133 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 SNTB1Q13884 538 aaKnown RBP5.68□□□□□ -1.5
VPS41-204ENST00000413141 ZNF181Q2M3W8 571 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 PYDC2Q56P42 97 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 TMEM69Q5SWH9 247 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 NCMAPQ5T1S8 102 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 PYHIN1Q6K0P9 492 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 C1QL2Q7Z5L3 287 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 CALHM1Q8IU99 346 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 DMRTC2Q8IXT2 367 aaPredicted RBP5.68□□□□□ -1.5
VPS41-204ENST00000413141 IZUMO1Q8IYV9 350 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 ZNF843Q8N446 348 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 ZNF808Q8N4W9 903 aaPredicted RBP5.68□□□□□ -1.5
VPS41-204ENST00000413141 ZNF611Q8N823 705 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 GDPD1Q8N9F7 314 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 DTX3Q8N9I9 347 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 TMEM104Q8NE00 496 aa5.68□□□□□ -1.5
VPS41-204ENST00000413141 OR8G5Q8NG78 346 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms