RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 FTMTQ8N4E7 242 aa15.78■□□□□ 0.12
SF3A1-202ENST00000411423 OR8J1Q8NGP2 316 aa15.78■□□□□ 0.12
SF3A1-202ENST00000411423 ZFAND2BQ8WV99 257 aa15.78■□□□□ 0.12
SF3A1-202ENST00000411423 DUX5Q96PT3 197 aa15.78■□□□□ 0.12
SF3A1-202ENST00000411423 MNTQ99583 582 aa15.78■□□□□ 0.12
SF3A1-202ENST00000411423 OR51I2Q9H344 312 aa15.78■□□□□ 0.12
SF3A1-202ENST00000411423 OR52A1Q9UKL2 312 aa15.78■□□□□ 0.12
SF3A1-202ENST00000411423 GTF2A1LQ9UNN4 478 aa15.78■□□□□ 0.12
SF3A1-202ENST00000411423 PIGLQ9Y2B2 252 aa15.78■□□□□ 0.12
SF3A1-202ENST00000411423 A6NIN4 97 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 ZNF732B4DXR9 585 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 P2RY10O00398 339 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 TMPRSS2O15393 492 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 NDUFA2O43678 99 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 ENSAO43768 121 aaKnown RBP15.77■□□□□ 0.12
SF3A1-202ENST00000411423 RPP14O95059 124 aaKnown RBP15.77■□□□□ 0.12
SF3A1-202ENST00000411423 MUC1P15941 1255 aaPredicted RBP15.77■□□□□ 0.12
SF3A1-202ENST00000411423 FPR2P25090 351 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 UBA52P62987 128 aaKnown RBP15.77■□□□□ 0.12
SF3A1-202ENST00000411423 ZNF85Q03923 595 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 EGR3Q06889 387 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 SNCBQ16143 134 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 MICBQ29980 383 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 CEACAM21Q3KPI0 293 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 Q6ZSR3 168 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 MOB3CQ70IA8 216 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 BTN2A1Q7KYR7 527 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 DOK3Q7L591 496 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 CBR4Q8N4T8 237 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 OR10Z1Q8NGY1 313 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 OR14K1Q8NGZ2 314 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 FAM216AQ8WUB2 273 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 RAB3IPQ96QF0 476 aaPredicted RBP15.77■□□□□ 0.12
SF3A1-202ENST00000411423 TBX15Q96SF7 602 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 SLC29A1Q99808 456 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 ABCB9Q9NP78 766 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 TRIM36Q9NQ86 728 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 V9GYS6 101 aa15.77■□□□□ 0.12
SF3A1-202ENST00000411423 FBN3Q75N90 2809 aa15.76■□□□□ 0.11
SF3A1-202ENST00000411423 ENTPD6O75354 484 aa15.76■□□□□ 0.11
SF3A1-202ENST00000411423 DHRS3O75911 302 aa15.76■□□□□ 0.11
SF3A1-202ENST00000411423 ALDH3A2P51648 485 aa15.76■□□□□ 0.11
SF3A1-202ENST00000411423 RIPPLY1Q0D2K3 151 aa15.76■□□□□ 0.11
SF3A1-202ENST00000411423 RUSC1-AS1Q66K80 236 aa15.76■□□□□ 0.11
SF3A1-202ENST00000411423 ZFP1Q6P2D0 407 aa15.76■□□□□ 0.11
SF3A1-202ENST00000411423 BRD3OSQ6XYD6 125 aa15.76■□□□□ 0.11
SF3A1-202ENST00000411423 C9orf139Q6ZV77 190 aa15.76■□□□□ 0.11
SF3A1-202ENST00000411423 RORBQ92753 470 aa15.76■□□□□ 0.11
SF3A1-202ENST00000411423 HRASLS5Q96KN8 279 aa15.76■□□□□ 0.11
SF3A1-202ENST00000411423 SIRPDQ9H106 197 aa15.76■□□□□ 0.11
SF3A1-202ENST00000411423 TENM1Q9UKZ4 2725 aa15.75■□□□□ 0.11
SF3A1-202ENST00000411423 DNAJC9-AS1A6NH13 148 aa15.75■□□□□ 0.11
SF3A1-202ENST00000411423 ZNF879B4DU55 563 aa15.75■□□□□ 0.11
SF3A1-202ENST00000411423 H3BSH0 61 aa15.75■□□□□ 0.11
SF3A1-202ENST00000411423 TRIM77I1YAP6 450 aa15.75■□□□□ 0.11
SF3A1-202ENST00000411423 OR2T7P0C7T2 308 aa15.75■□□□□ 0.11
SF3A1-202ENST00000411423 ATP6V1B1P15313 513 aa15.75■□□□□ 0.11
SF3A1-202ENST00000411423 TGM4P49221 684 aa15.75■□□□□ 0.11
SF3A1-202ENST00000411423 ISL1P61371 349 aa15.75■□□□□ 0.11
SF3A1-202ENST00000411423 ODF4Q2M2E3 257 aa15.75■□□□□ 0.11
SF3A1-202ENST00000411423 BCL2L15Q5TBC7 163 aa15.75■□□□□ 0.11
SF3A1-202ENST00000411423 TMEM42Q69YG0 159 aa15.75■□□□□ 0.11
SF3A1-202ENST00000411423 CATSPERDQ86XM0 798 aa15.75■□□□□ 0.11
SF3A1-202ENST00000411423 YIPF7Q8N8F6 280 aa15.75■□□□□ 0.11
SF3A1-202ENST00000411423 OR10H4Q8NGA5 316 aa15.75■□□□□ 0.11
SF3A1-202ENST00000411423 OR2T27Q8NH04 317 aa15.75■□□□□ 0.11
SF3A1-202ENST00000411423 ST8SIA4Q92187 359 aa15.75■□□□□ 0.11
SF3A1-202ENST00000411423 GAFA1Q96PS6 74 aa15.75■□□□□ 0.11
SF3A1-202ENST00000411423 PCGF1Q9BSM1 259 aa15.75■□□□□ 0.11
SF3A1-202ENST00000411423 MS4A7Q9GZW8 240 aaPredicted RBP15.75■□□□□ 0.11
SF3A1-202ENST00000411423 MOB1AQ9H8S9 216 aa15.75■□□□□ 0.11
SF3A1-202ENST00000411423 S100A14Q9HCY8 104 aa15.75■□□□□ 0.11
SF3A1-202ENST00000411423 GPR173Q9NS66 373 aa15.75■□□□□ 0.11
SF3A1-202ENST00000411423 SNX5Q9Y5X3 404 aa15.75■□□□□ 0.11
SF3A1-202ENST00000411423 TMEM89A2RUT3 159 aa15.74■□□□□ 0.11
SF3A1-202ENST00000411423 J3QRE1 110 aa15.74■□□□□ 0.11
SF3A1-202ENST00000411423 GABRB1P18505 474 aa15.74■□□□□ 0.11
SF3A1-202ENST00000411423 CCL1P22362 96 aa15.74■□□□□ 0.11
SF3A1-202ENST00000411423 CDC42P60953 191 aa15.74■□□□□ 0.11
SF3A1-202ENST00000411423 GNG3P63215 75 aa15.74■□□□□ 0.11
SF3A1-202ENST00000411423 IKZF1Q13422 519 aa15.74■□□□□ 0.11
SF3A1-202ENST00000411423 DGUOKQ16854 277 aa15.74■□□□□ 0.11
SF3A1-202ENST00000411423 ATPAF1Q5TC12 328 aaPredicted RBP15.74■□□□□ 0.11
SF3A1-202ENST00000411423 ZBTB37Q5TC79 503 aa15.74■□□□□ 0.11
SF3A1-202ENST00000411423 CD276Q5ZPR3 534 aa15.74■□□□□ 0.11
SF3A1-202ENST00000411423 PLCXD3Q63HM9 321 aa15.74■□□□□ 0.11
SF3A1-202ENST00000411423 ZNF788Q6ZQV5 615 aa15.74■□□□□ 0.11
SF3A1-202ENST00000411423 THAP5Q7Z6K1 395 aa15.74■□□□□ 0.11
SF3A1-202ENST00000411423 PRSS35Q8N3Z0 413 aa15.74■□□□□ 0.11
SF3A1-202ENST00000411423 LY6G5BQ8NDX9 201 aa15.74■□□□□ 0.11
SF3A1-202ENST00000411423 OR5A2Q8NGI9 324 aa15.74■□□□□ 0.11
SF3A1-202ENST00000411423 ANGPTL6Q8NI99 470 aa15.74■□□□□ 0.11
SF3A1-202ENST00000411423 AQP3Q92482 292 aa15.74■□□□□ 0.11
SF3A1-202ENST00000411423 TAF15Q92804 592 aaKnown RBP eCLIP15.74■□□□□ 0.11
SF3A1-202ENST00000411423 C12orf43Q96C57 262 aaKnown RBP15.74■□□□□ 0.11
SF3A1-202ENST00000411423 ZNF488Q96MN9 340 aa15.74■□□□□ 0.11
SF3A1-202ENST00000411423 JMJD8Q96S16 334 aa15.74■□□□□ 0.11
SF3A1-202ENST00000411423 ENPP5Q9UJA9 477 aa15.74■□□□□ 0.11
SF3A1-202ENST00000411423 RPUSD1Q9UJJ7 312 aaKnown RBP15.74■□□□□ 0.11
SF3A1-202ENST00000411423 METTL15A6NJ78 407 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms