RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 ZNF730Q6ZMV8 503 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 DPY19L2P2Q6ZN68 376 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZBTB49Q6ZSB9 765 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 PTCHD4Q6ZW05 846 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 TMPRSS11FQ6ZWK6 438 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 SLC16A9Q7RTY1 509 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 OVCH2Q7RTZ1 564 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 WDR86Q86TI4 376 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF329Q86UD4 541 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 CALHM1Q8IU99 346 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 FUNDC1Q8IVP5 155 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF695Q8IW36 515 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 OFCC1Q8IZS5 231 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF561Q8N587 486 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 DPP10Q8N608 796 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 COMMD1Q8N668 190 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 KLHL30-AS1Q8NEE0 82 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 CSNK2A3Q8NEV1 391 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR4M1Q8NGD0 313 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR2T27Q8NH04 317 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 IL17DQ8TAD2 202 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF671Q8TAW3 534 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 NDNFQ8TB73 568 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 CHPT1Q8WUD6 406 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 DDB2Q92466 427 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 RPL3LQ92901 407 aaKnown RBP1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 SPSB4Q96A44 273 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 RBMXL1Q96E39 390 aaKnown RBP1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 SDSLQ96GA7 329 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 RNF170Q96K19 258 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 LYZL4Q96KX0 146 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 TSSK2Q96PF2 358 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 DUX3Q96PT4 197 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 HIST1H2AAQ96QV6 131 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 GPX7Q96SL4 187 aaPredicted RBP1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 CDRT15Q96T59 188 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 NMNAT3Q96T66 252 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 CGREF1Q99674 301 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 KCNJ15Q99712 375 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 SH3GL1Q99961 368 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 SLC25A33Q9BSK2 321 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 COPS4Q9BT78 406 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 FNDC11Q9BVV2 318 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 RTL8AQ9BWD3 113 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 RABEP2Q9H5N1 569 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 KAT8Q9H7Z6 458 aaKnown RBP1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 YY1AP1Q9H869 796 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 SP140LQ9H930 580 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 SRA1Q9HD15 236 aaKnown RBP1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 ABCB9Q9NP78 766 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 PNRC2Q9NPJ4 139 aaKnown RBP1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 C19orf12Q9NSK7 152 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 SCOCQ9UIL1 159 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 KCNG2Q9UJ96 466 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 B9D1Q9UPM9 204 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 TMEM5Q9Y2B1 443 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 RHBDD3Q9Y3P4 386 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 HILPDAQ9Y5L2 63 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 N6AMT1Q9Y5N5 214 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 MPC1Q9Y5U8 109 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 LYVE1Q9Y5Y7 322 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 SIRT4Q9Y6E7 314 aaPredicted RBP1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 MINOS1-NBL1R4GNA1 71 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 DNAH3Q8TD57 4116 aa1.88□□□□□ -2.11
RNU4-53P-201ENST00000410828 IGHV2-26A0A0B4J1V2 119 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 hCG_38984A0A1B0GV85 526 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 SH2D7A6NKC9 451 aaPredicted RBP1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF850A8MQ14 1090 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 SERPINE3A8MV23 424 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF878C9JN71 531 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 ANGPT2O15123 496 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 ARPC3O15145 178 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 LDLRAD4O15165 306 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 SLC22A2O15244 555 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 TBX1O43435 398 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 SLC25A17O43808 307 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 MTRF1O75570 445 aaKnown RBP1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 SASH3O75995 380 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR2F2O95006 317 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 CST4P01036 141 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 APOC1P02654 83 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 RBP4P02753 201 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 TFF1P04155 84 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 TK1P04183 234 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 ANXA2P07355 339 aaKnown RBP1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 SNRNP70P08621 437 aaKnown RBP1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 FRMD6-AS1P0C7T7 363 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 FAM106CPP0CH98 169 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF728P0DKX0 622 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 IGHV1-8P0DP01 117 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 PIPP12273 146 aaPredicted RBP1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 JUNBP17275 347 aaPredicted RBP1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 ANOS1P23352 680 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 MYF6P23409 242 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 CD24P25063 80 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 SLC6A6P31641 620 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 PRDX2P32119 198 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 DCTDP32321 178 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 KDELR2P33947 212 aa1.87□□□□□ -2.11
RNU4-53P-201ENST00000410828 MNDAP41218 407 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms