RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 CNOT2Q9NZN8 540 aaKnown RBP9.16□□□□□ -0.94
CHMP3-205ENST00000409810 CDC42EP3Q9UKI2 254 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 DIMT1Q9UNQ2 313 aaKnown RBP9.16□□□□□ -0.94
CHMP3-205ENST00000409810 LRCH1Q9Y2L9 728 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 CAB39Q9Y376 341 aaPredicted RBP9.16□□□□□ -0.94
CHMP3-205ENST00000409810 ARHGAP32A7KAX9 2087 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 ANK3Q12955 4377 aaKnown RBP9.15□□□□□ -0.94
CHMP3-205ENST00000409810 SETD2Q9BYW2 2564 aaPredicted RBP9.15□□□□□ -0.94
CHMP3-205ENST00000409810 A0A1B0GTI1 187 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 LOC107986453A0A1B0GWG9 222 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 OOEPA6NGQ2 149 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 CEACAM18A8MTB9 384 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 ZNF732B4DXR9 585 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 LGALS8O00214 317 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 CDIPTO14735 213 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 NDUFA2O43678 99 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 ATP6V1G2O95670 118 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 ISG15P05161 165 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 GNAO1P09471 354 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 KIR3DL2P43630 455 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 CSNK2BP67870 215 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 CNN3Q15417 329 aaKnown RBP9.15□□□□□ -0.94
CHMP3-205ENST00000409810 CHRFAM7AQ494W8 412 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 TMEM42Q69YG0 159 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 WDR86Q86TI4 376 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 TEX29Q8N6K0 151 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 BOLLQ8N9W6 283 aaKnown RBP9.15□□□□□ -0.94
CHMP3-205ENST00000409810 FBLIM1Q8WUP2 373 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 LRRC29Q8WV35 223 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 TMEM246Q9BRR3 403 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 SHARPINQ9H0F6 387 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 LPAR2Q9HBW0 351 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 TMEM165Q9HC07 324 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 HHLA2Q9UM44 414 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 SLC7A11Q9UPY5 501 aa9.15□□□□□ -0.94
CHMP3-205ENST00000409810 NAV3Q8IVL0 2385 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 A0A0G2JMP0 313 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 A0A0X1KG70 313 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 ANKRD61A6NGH8 418 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 TMEM212A6NML5 194 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 A8MXK9 166 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 F5H0A9 414 aaPredicted RBP9.14□□□□□ -0.95
CHMP3-205ENST00000409810 C3orf80F5H4A9 247 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 CRLF1O75462 422 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 ZNF205O95201 554 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 ZNF20P17024 532 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 GATA3P23771 443 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 THBS2P35442 1172 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 CFHR2P36980 270 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 TGM4P49221 684 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 NPY4RP50391 375 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 HNRNPA0Q13151 305 aaKnown RBP9.14□□□□□ -0.95
CHMP3-205ENST00000409810 MICBQ29980 383 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 CR1LQ2VPA4 569 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 CCDC58Q4VC31 144 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 FAM76BQ5HYJ3 339 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 FAM201AQ5SY85 155 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 SFRP4Q6FHJ7 346 aaPredicted RBP9.14□□□□□ -0.95
CHMP3-205ENST00000409810 WDR82Q6UXN9 313 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 IZUMO2Q6UXV1 221 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 ZNF826PQ6ZT77 177 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 ZNF573Q86YE8 665 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 C11orf53Q8IXP5 236 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 STX19Q8N4C7 294 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 GCSAMQ8N6F7 178 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 ZNF676Q8N7Q3 588 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 SCCPDHQ8NBX0 429 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 BPIFB6Q8NFQ5 453 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 OR4M2Q8NGB6 313 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 OR5AK2Q8NH90 309 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 ZNF671Q8TAW3 534 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 PP6455Q8WZ26 134 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 RPL3LQ92901 407 aaKnown RBP9.14□□□□□ -0.95
CHMP3-205ENST00000409810 C12orf43Q96C57 262 aaKnown RBP9.14□□□□□ -0.95
CHMP3-205ENST00000409810 NEIL1Q96FI4 390 aaPredicted RBP9.14□□□□□ -0.95
CHMP3-205ENST00000409810 ZNF649Q9BS31 505 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 SSBP3Q9BWW4 388 aaPredicted RBP9.14□□□□□ -0.95
CHMP3-205ENST00000409810 BEX2Q9BXY8 128 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 CHST5Q9GZS9 411 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 PPP1R3EQ9H7J1 279 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 ISG20L2Q9H9L3 353 aaKnown RBP9.14□□□□□ -0.95
CHMP3-205ENST00000409810 GPR173Q9NS66 373 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 PLCXD1Q9NUJ7 323 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 HIF1ANQ9NWT6 349 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 FRRS1LQ9P0K9 344 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 OR5V1Q9UGF6 321 aa9.14□□□□□ -0.95
CHMP3-205ENST00000409810 NIPBLQ6KC79 2804 aaeCLIP9.13□□□□□ -0.95
CHMP3-205ENST00000409810 PPIAL4CA0A0B4J2A2 164 aa9.13□□□□□ -0.95
CHMP3-205ENST00000409810 OR4C45A6NMZ5 311 aa9.13□□□□□ -0.95
CHMP3-205ENST00000409810 SRRM5B3KS81 715 aa9.13□□□□□ -0.95
CHMP3-205ENST00000409810 H3BSH0 61 aa9.13□□□□□ -0.95
CHMP3-205ENST00000409810 J3QLI3 93 aa9.13□□□□□ -0.95
CHMP3-205ENST00000409810 MYL12BO14950 172 aa9.13□□□□□ -0.95
CHMP3-205ENST00000409810 PLPP2O43688 288 aa9.13□□□□□ -0.95
CHMP3-205ENST00000409810 LHBP01229 141 aa9.13□□□□□ -0.95
CHMP3-205ENST00000409810 LIMS3P0CW19 117 aa9.13□□□□□ -0.95
CHMP3-205ENST00000409810 LIMS4P0CW20 117 aa9.13□□□□□ -0.95
CHMP3-205ENST00000409810 MUC1P15941 1255 aaPredicted RBP9.13□□□□□ -0.95
CHMP3-205ENST00000409810 CD80P33681 288 aa9.13□□□□□ -0.95
CHMP3-205ENST00000409810 VHLP40337 213 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms