RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 TRAF3IP2O43734 574 aaPredicted RBP5.12□□□□□ -1.59
LSM5-203ENST00000409782 CHP2O43745 196 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 PPP1R3DO95685 299 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 LGI1O95970 557 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 OPN1SWP03999 348 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 PAX7P23759 505 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 RPS5P46782 204 aaKnown RBP5.12□□□□□ -1.59
LSM5-203ENST00000409782 GZMMP51124 257 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 DVL1P1P54792 670 aaPredicted RBP5.12□□□□□ -1.59
LSM5-203ENST00000409782 DMTNQ08495 405 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 OR1Q1Q15612 314 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 GABRA6Q16445 453 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 ZNF74Q16587 644 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 ZNF672Q499Z4 452 aaPredicted RBP5.12□□□□□ -1.59
LSM5-203ENST00000409782 GLIPR1L2Q4G1C9 344 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 TSPO2Q5TGU0 170 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 TMEM225Q6GV28 225 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 NANOGP8Q6NSW7 305 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 FOXL2NBQ6ZUU3 175 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 CCDC80Q76M96 950 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 CALHM3Q86XJ0 350 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 ZIC4Q8N9L1 334 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 CCDC197Q8NCU1 140 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 WFDC11Q8NEX6 87 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 KBTBD8Q8NFY9 601 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 OR10A6Q8NH74 314 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 C10orf82Q8WW14 230 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 TMEM37Q8WXS4 190 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 MCHR2Q969V1 340 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 TAMM41Q96BW9 452 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 LRRC58Q96CX6 371 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 SLC41A3Q96GZ6 507 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 CXorf58Q96LI9 332 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 OXGR1Q96P68 337 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 ALKBH3Q96Q83 286 aaPredicted RBP5.12□□□□□ -1.59
LSM5-203ENST00000409782 LINC00470Q9BZP3 86 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 POLR2J2Q9GZM3 115 aaKnown RBP5.12□□□□□ -1.59
LSM5-203ENST00000409782 POLR2J3Q9H1A7 115 aaKnown RBP5.12□□□□□ -1.59
LSM5-203ENST00000409782 NANOGQ9H9S0 305 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 SLC17A5Q9NRA2 495 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 SLC7A10Q9NS82 523 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 GID8Q9NWU2 228 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 B9D1Q9UPM9 204 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 AP3M1Q9Y2T2 418 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 WIPI2Q9Y4P8 454 aa5.12□□□□□ -1.59
LSM5-203ENST00000409782 HIVEP2P31629 2446 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 ARPC4-TTLL3A0A0A6YYG9 625 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 TRAPPC13A5PLN9 417 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 SNURFLB1AK76 121 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 SHISA9B4DS77 424 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 RPL36A-HNRNPH2H7BZ11 118 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 M0QX08 132 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 ABCD4O14678 606 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 CCDC22O60826 627 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 TSC22D2O75157 780 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 IFNA14P01570 189 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 BGLAPP02818 100 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 CLUP10909 449 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 ZNF43P17038 809 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 GRPRP30550 384 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 CRYBA2P53672 197 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 DSCR9P59020 149 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 PRPS1P60891 318 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 PUDPQ08623 228 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 C1DQ13901 141 aaKnown RBP5.11□□□□□ -1.59
LSM5-203ENST00000409782 TATDN3Q17R31 274 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 FAM106AQ4KMX7 169 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 LIPKQ5VXJ0 399 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 BIVMQ86UB2 503 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 OR6T1Q8NGN1 323 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 OR1K1Q8NGR3 316 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 MAGEE2Q8TD90 523 aaPredicted RBP5.11□□□□□ -1.59
LSM5-203ENST00000409782 GATAD1Q8WUU5 269 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 HPSE2Q8WWQ2 592 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 SLC25A36Q96CQ1 311 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 NEDD4LQ96PU5 975 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 MCHR1Q99705 422 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 ECSITQ9BQ95 431 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 ZNF426Q9BUY5 554 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 SLC19A3Q9BZV2 496 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 FAIMQ9NVQ4 179 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 MRPL39Q9NYK5 338 aaKnown RBP5.11□□□□□ -1.59
LSM5-203ENST00000409782 MIOXQ9UGB7 285 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 SELENOKQ9Y6D0 94 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 ABCA2Q9BZC7 2435 aa5.11□□□□□ -1.59
LSM5-203ENST00000409782 CPSF4LA6NMK7 179 aaKnown RBP5.1□□□□□ -1.59
LSM5-203ENST00000409782 K7EQM0 130 aa5.1□□□□□ -1.59
LSM5-203ENST00000409782 M0R1B8 84 aa5.1□□□□□ -1.59
LSM5-203ENST00000409782 SLC1A7O00341 560 aa5.1□□□□□ -1.59
LSM5-203ENST00000409782 NDUFAB1O14561 156 aa5.1□□□□□ -1.59
LSM5-203ENST00000409782 TPST2O60704 377 aa5.1□□□□□ -1.59
LSM5-203ENST00000409782 UPK3AO75631 287 aa5.1□□□□□ -1.59
LSM5-203ENST00000409782 ZNF432O94892 652 aa5.1□□□□□ -1.59
LSM5-203ENST00000409782 OR5F1O95221 314 aa5.1□□□□□ -1.59
LSM5-203ENST00000409782 LYPD3O95274 346 aa5.1□□□□□ -1.59
LSM5-203ENST00000409782 IGF2P01344 180 aa5.1□□□□□ -1.59
LSM5-203ENST00000409782 SOD3P08294 240 aa5.1□□□□□ -1.59
LSM5-203ENST00000409782 NQO1P15559 274 aaKnown RBP5.1□□□□□ -1.59
LSM5-203ENST00000409782 RBM34P42696 430 aaKnown RBP5.1□□□□□ -1.59
LSM5-203ENST00000409782 ZNF83P51522 516 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms