RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 TMEM72A0PK05 275 aa1.45□□□□□ -2.18
PMS1-203ENST00000409593 ERI3O43414 337 aaKnown RBP1.45□□□□□ -2.18
PMS1-203ENST00000409593 CTNSO60931 367 aa1.45□□□□□ -2.18
PMS1-203ENST00000409593 TDP2O95551 362 aa1.45□□□□□ -2.18
PMS1-203ENST00000409593 PTHP01270 115 aa1.45□□□□□ -2.18
PMS1-203ENST00000409593 IGHMP01871 453 aa1.45□□□□□ -2.18
PMS1-203ENST00000409593 HLA-HP01893 362 aa1.45□□□□□ -2.18
PMS1-203ENST00000409593 FUSP35637 526 aaKnown RBP eCLIP1.45□□□□□ -2.18
PMS1-203ENST00000409593 NBL1P41271 181 aa1.45□□□□□ -2.18
PMS1-203ENST00000409593 ZNF33AQ06730 810 aa1.45□□□□□ -2.18
PMS1-203ENST00000409593 ADIGQ0VDE8 80 aa1.45□□□□□ -2.18
PMS1-203ENST00000409593 SPNS3Q6ZMD2 512 aa1.45□□□□□ -2.18
PMS1-203ENST00000409593 Q6ZS52 159 aa1.45□□□□□ -2.18
PMS1-203ENST00000409593 TMPPEQ6ZT21 453 aa1.45□□□□□ -2.18
PMS1-203ENST00000409593 GABRG1Q8N1C3 465 aa1.45□□□□□ -2.18
PMS1-203ENST00000409593 ZFP62Q8NB50 900 aaPredicted RBP1.45□□□□□ -2.18
PMS1-203ENST00000409593 SND1-IT1Q9HBX3 110 aa1.45□□□□□ -2.18
PMS1-203ENST00000409593 HEBP1Q9NRV9 189 aa1.45□□□□□ -2.18
PMS1-203ENST00000409593 GCNT4Q9P109 453 aa1.45□□□□□ -2.18
PMS1-203ENST00000409593 VWA8A3KMH1 1905 aa1.44□□□□□ -2.18
PMS1-203ENST00000409593 MYL12BO14950 172 aa1.44□□□□□ -2.18
PMS1-203ENST00000409593 FARS2O95363 451 aaKnown RBP1.44□□□□□ -2.18
PMS1-203ENST00000409593 OXTP01178 125 aa1.44□□□□□ -2.18
PMS1-203ENST00000409593 ERCC1P07992 297 aaPredicted RBP1.44□□□□□ -2.18
PMS1-203ENST00000409593 KRT16P08779 473 aa1.44□□□□□ -2.18
PMS1-203ENST00000409593 INCA1Q0VD86 236 aa1.44□□□□□ -2.18
PMS1-203ENST00000409593 TRMT10CQ7L0Y3 403 aaKnown RBP1.44□□□□□ -2.18
PMS1-203ENST00000409593 OR52E5Q8NH55 327 aa1.44□□□□□ -2.18
PMS1-203ENST00000409593 OR1S1Q8NH92 325 aa1.44□□□□□ -2.18
PMS1-203ENST00000409593 MCUR1Q96AQ8 359 aa1.44□□□□□ -2.18
PMS1-203ENST00000409593 RDH12Q96NR8 316 aa1.44□□□□□ -2.18
PMS1-203ENST00000409593 DERL3Q96Q80 235 aa1.44□□□□□ -2.18
PMS1-203ENST00000409593 CCDC77Q9BR77 488 aa1.44□□□□□ -2.18
PMS1-203ENST00000409593 MCUBQ9NWR8 336 aa1.44□□□□□ -2.18
PMS1-203ENST00000409593 NDRG2Q9UN36 371 aaKnown RBP1.44□□□□□ -2.18
PMS1-203ENST00000409593 IGHV6-1A0A0B4J1U7 121 aa1.43□□□□□ -2.18
PMS1-203ENST00000409593 TEX46H3BTG2 121 aa1.43□□□□□ -2.18
PMS1-203ENST00000409593 IFNW1P05000 195 aa1.43□□□□□ -2.18
PMS1-203ENST00000409593 IFI30P13284 250 aa1.43□□□□□ -2.18
PMS1-203ENST00000409593 CXCR1P25024 350 aa1.43□□□□□ -2.18
PMS1-203ENST00000409593 SLC1A2P43004 574 aa1.43□□□□□ -2.18
PMS1-203ENST00000409593 OR2B8PP59922 312 aa1.43□□□□□ -2.18
PMS1-203ENST00000409593 RPS15AP62244 130 aaKnown RBP1.43□□□□□ -2.18
PMS1-203ENST00000409593 GRB2P62993 217 aaKnown RBP1.43□□□□□ -2.18
PMS1-203ENST00000409593 MERTKQ12866 999 aa1.43□□□□□ -2.18
PMS1-203ENST00000409593 CUL2Q13617 745 aa1.43□□□□□ -2.18
PMS1-203ENST00000409593 LGALSLQ3ZCW2 172 aaPredicted RBP1.43□□□□□ -2.18
PMS1-203ENST00000409593 EIF3MQ7L2H7 374 aaKnown RBP1.43□□□□□ -2.18
PMS1-203ENST00000409593 RNF10Q8N5U6 811 aaKnown RBP1.43□□□□□ -2.18
PMS1-203ENST00000409593 WDR31Q8NA23 367 aa1.43□□□□□ -2.18
PMS1-203ENST00000409593 ITLN2Q8WWU7 325 aaPredicted RBP1.43□□□□□ -2.18
PMS1-203ENST00000409593 SCGB3A2Q96PL1 93 aa1.43□□□□□ -2.18
PMS1-203ENST00000409593 PEBP4Q96S96 227 aa1.43□□□□□ -2.18
PMS1-203ENST00000409593 CHP1Q99653 195 aa1.43□□□□□ -2.18
PMS1-203ENST00000409593 GEMIN7Q9H840 131 aaKnown RBP1.43□□□□□ -2.18
PMS1-203ENST00000409593 FAM60AQ9NP50 221 aa1.43□□□□□ -2.18
PMS1-203ENST00000409593 TMEM100Q9NV29 134 aa1.43□□□□□ -2.18
PMS1-203ENST00000409593 ENPP4Q9Y6X5 453 aa1.43□□□□□ -2.18
PMS1-203ENST00000409593 COL11A1P12107 1806 aaPredicted RBP1.43□□□□□ -2.18
PMS1-203ENST00000409593 GOLGA8JA6NMD2 632 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 BCKDKO14874 412 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 CDH16O75309 829 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 ENTPD6O75354 484 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 FCN3O75636 299 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 CTSGP08311 255 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 GOLGA8HP0CJ92 632 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 FOXA1P55317 472 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 HMGN5P82970 282 aaKnown RBP1.42□□□□□ -2.18
PMS1-203ENST00000409593 SPANXN2Q5MJ10 180 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 MRPL2Q5T653 305 aaKnown RBP1.42□□□□□ -2.18
PMS1-203ENST00000409593 STEAP4Q687X5 459 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 TMEM144Q7Z5S9 345 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 ISG20Q96AZ6 181 aaKnown RBP1.42□□□□□ -2.18
PMS1-203ENST00000409593 DOCK6Q96HP0 2047 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 FAM19A4Q96LR4 140 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 ZNF649Q9BS31 505 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 API5Q9BZZ5 524 aaKnown RBP1.42□□□□□ -2.18
PMS1-203ENST00000409593 FANCEQ9HB96 536 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 FBXO8Q9NRD0 319 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 TREX1Q9NSU2 369 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 SSH2Q76I76 1423 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 H3BQ85 93 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 ZNF73O43830 326 aaPredicted RBP1.42□□□□□ -2.18
PMS1-203ENST00000409593 CXorf1O96002 111 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 IGKV1-16P04430 117 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 SEC11BP0C7V7 166 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 TSC22D1Q15714 1073 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 GABRA6Q16445 453 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 LUZP2Q86TE4 346 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 EIF4E3Q8N5X7 224 aaKnown RBP1.42□□□□□ -2.18
PMS1-203ENST00000409593 RCN3Q96D15 328 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 MRPL48Q96GC5 212 aaKnown RBP1.42□□□□□ -2.18
PMS1-203ENST00000409593 ZNF75AQ96N20 296 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 CYP3A43Q9HB55 503 aa1.42□□□□□ -2.18
PMS1-203ENST00000409593 C20orf96Q9NUD7 363 aaPredicted RBP1.42□□□□□ -2.18
PMS1-203ENST00000409593 KCNE1BA0A087WTH5 132 aa1.41□□□□□ -2.18
PMS1-203ENST00000409593 AGTP01019 485 aa1.41□□□□□ -2.18
PMS1-203ENST00000409593 ZNF708P17019 499 aa1.41□□□□□ -2.18
PMS1-203ENST00000409593 TUFMP49411 452 aaKnown RBP1.41□□□□□ -2.18
PMS1-203ENST00000409593 ZNF181Q2M3W8 571 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms