RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 MAP1LC3B2A6NCE7 125 aa15.83■□□□□ 0.12
SMPD4-202ENST00000409031 FAM24AA6NFZ4 105 aa15.83■□□□□ 0.12
SMPD4-202ENST00000409031 CTSDP07339 412 aaPredicted RBP15.83■□□□□ 0.12
SMPD4-202ENST00000409031 GUSBP08236 651 aa15.83■□□□□ 0.12
SMPD4-202ENST00000409031 ZNF121P58317 390 aaPredicted RBP15.83■□□□□ 0.12
SMPD4-202ENST00000409031 RAB40CQ96S21 281 aa15.83■□□□□ 0.12
SMPD4-202ENST00000409031 MAP1LC3BQ9GZQ8 125 aa15.83■□□□□ 0.12
SMPD4-202ENST00000409031 CNTD2Q9H8S5 307 aa15.83■□□□□ 0.12
SMPD4-202ENST00000409031 LIN7CQ9NUP9 197 aaKnown RBP15.83■□□□□ 0.12
SMPD4-202ENST00000409031 ARL2-SNX15V9GYD0 113 aa15.83■□□□□ 0.12
SMPD4-202ENST00000409031 SPAG17Q6Q759 2223 aa15.83■□□□□ 0.12
SMPD4-202ENST00000409031 OR10J1P30954 320 aa15.83■□□□□ 0.12
SMPD4-202ENST00000409031 PMP22Q01453 160 aa15.83■□□□□ 0.12
SMPD4-202ENST00000409031 MAML2Q8IZL2 1156 aaPredicted RBP15.83■□□□□ 0.12
SMPD4-202ENST00000409031 IL22RA2Q969J5 263 aa15.83■□□□□ 0.12
SMPD4-202ENST00000409031 RIMS4Q9H426 269 aaPredicted RBP15.83■□□□□ 0.12
SMPD4-202ENST00000409031 NAT8Q9UHE5 227 aa15.83■□□□□ 0.12
SMPD4-202ENST00000409031 SEMA7AO75326 666 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 VAMP5O95183 116 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 GLULP15104 373 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 CDX1P47902 265 aaPredicted RBP15.82■□□□□ 0.12
SMPD4-202ENST00000409031 EIF4E3Q8N5X7 224 aaKnown RBP15.82■□□□□ 0.12
SMPD4-202ENST00000409031 RCC2Q9P258 522 aaKnown RBP15.82■□□□□ 0.12
SMPD4-202ENST00000409031 MASP2O00187 686 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 TNFRSF10CO14798 259 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 GAPDHP04406 335 aaKnown RBP15.82■□□□□ 0.12
SMPD4-202ENST00000409031 KTI12Q96EK9 354 aaPredicted RBP15.82■□□□□ 0.12
SMPD4-202ENST00000409031 SOX7Q9BT81 388 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 MCTS1Q9ULC4 181 aaKnown RBP15.82■□□□□ 0.12
SMPD4-202ENST00000409031 KCNMB2Q9Y691 235 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 TRAV8-7A0A075B6U6 113 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 A0A1W2PNV4 684 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 MRPL33O75394 65 aaKnown RBP15.82■□□□□ 0.12
SMPD4-202ENST00000409031 OR2J2O76002 312 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 MBPP02686 304 aaPredicted RBP15.82■□□□□ 0.12
SMPD4-202ENST00000409031 CCL5P13501 91 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 H2BFSP57053 126 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 FAM3AP98173 230 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 NPEPL1Q8NDH3 523 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 CORO2AQ92828 525 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 GNG12Q9UBI6 72 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 MYO9BQ13459 2157 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 CLEC18AA5D8T8 446 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 ZNF814B7Z6K7 855 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 ADAM11O75078 769 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 SRYQ05066 204 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 GLRX5Q86SX6 157 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 CLEC18CQ8NCF0 446 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 OR5B3Q8NH48 314 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 FGF13Q92913 245 aa15.82■□□□□ 0.12
SMPD4-202ENST00000409031 H0Y8G0 127 aa15.81■□□□□ 0.12
SMPD4-202ENST00000409031 ONECUT2O95948 504 aa15.81■□□□□ 0.12
SMPD4-202ENST00000409031 NRASP01111 189 aa15.81■□□□□ 0.12
SMPD4-202ENST00000409031 TMIGD3P0DMS9 266 aaPredicted RBP15.81■□□□□ 0.12
SMPD4-202ENST00000409031 CD1CP29017 333 aa15.81■□□□□ 0.12
SMPD4-202ENST00000409031 UBE3DQ7Z6J8 389 aa15.81■□□□□ 0.12
SMPD4-202ENST00000409031 ZNF775Q96BV0 537 aaPredicted RBP15.81■□□□□ 0.12
SMPD4-202ENST00000409031 ST3GAL6Q9Y274 331 aa15.81■□□□□ 0.12
SMPD4-202ENST00000409031 KDF1Q8NAX2 398 aaPredicted RBP15.81■□□□□ 0.12
SMPD4-202ENST00000409031 CMTM2Q8TAZ6 248 aa15.81■□□□□ 0.12
SMPD4-202ENST00000409031 LINC01553A4QN01 128 aa15.81■□□□□ 0.12
SMPD4-202ENST00000409031 WDR1O75083 606 aa15.81■□□□□ 0.12
SMPD4-202ENST00000409031 HEXAP06865 529 aa15.81■□□□□ 0.12
SMPD4-202ENST00000409031 PPP2CBP62714 309 aa15.81■□□□□ 0.12
SMPD4-202ENST00000409031 PPP2CAP67775 309 aa15.81■□□□□ 0.12
SMPD4-202ENST00000409031 MZT1Q08AG7 82 aa15.81■□□□□ 0.12
SMPD4-202ENST00000409031 SHBQ15464 509 aa15.81■□□□□ 0.12
SMPD4-202ENST00000409031 C11orf40Q8WZ69 217 aa15.81■□□□□ 0.12
SMPD4-202ENST00000409031 ALG14Q96F25 216 aa15.81■□□□□ 0.12
SMPD4-202ENST00000409031 TMEM9BQ9NQ34 198 aa15.81■□□□□ 0.12
SMPD4-202ENST00000409031 RNF186Q9NXI6 227 aa15.81■□□□□ 0.12
SMPD4-202ENST00000409031 HYAL3O43820 417 aaPredicted RBP15.8■□□□□ 0.12
SMPD4-202ENST00000409031 CLN5O75503 358 aa15.8■□□□□ 0.12
SMPD4-202ENST00000409031 CFIP05156 583 aa15.8■□□□□ 0.12
SMPD4-202ENST00000409031 KCNK15Q9H427 330 aa15.8■□□□□ 0.12
SMPD4-202ENST00000409031 FAM166BA8MTA8 275 aa15.8■□□□□ 0.12
SMPD4-202ENST00000409031 DNASE2O00115 360 aaPredicted RBP15.8■□□□□ 0.12
SMPD4-202ENST00000409031 ICOSLGO75144 302 aa15.8■□□□□ 0.12
SMPD4-202ENST00000409031 CARD18P57730 90 aa15.8■□□□□ 0.12
SMPD4-202ENST00000409031 IL24Q13007 206 aa15.8■□□□□ 0.12
SMPD4-202ENST00000409031 OSR2Q8N2R0 312 aa15.8■□□□□ 0.12
SMPD4-202ENST00000409031 OR4N2Q8NGD1 307 aa15.8■□□□□ 0.12
SMPD4-202ENST00000409031 MTCH1Q9NZJ7 389 aa15.8■□□□□ 0.12
SMPD4-202ENST00000409031 KCNK7Q9Y2U2 307 aa15.8■□□□□ 0.12
SMPD4-202ENST00000409031 PIAS3Q9Y6X2 628 aa15.8■□□□□ 0.12
SMPD4-202ENST00000409031 LINC00587B1AMM8 73 aa15.8■□□□□ 0.12
SMPD4-202ENST00000409031 TERTO14746 1132 aaKnown RBP15.8■□□□□ 0.12
SMPD4-202ENST00000409031 OR5I1Q13606 314 aa15.8■□□□□ 0.12
SMPD4-202ENST00000409031 REC114Q7Z4M0 266 aa15.8■□□□□ 0.12
SMPD4-202ENST00000409031 RGP1Q92546 391 aaPredicted RBP15.8■□□□□ 0.12
SMPD4-202ENST00000409031 HIST1H2BAQ96A08 127 aa15.8■□□□□ 0.12
SMPD4-202ENST00000409031 ATAD5Q96QE3 1844 aa15.8■□□□□ 0.12
SMPD4-202ENST00000409031 DRD1P21728 446 aa15.8■□□□□ 0.12
SMPD4-202ENST00000409031 COL18A1P39060 1754 aa15.8■□□□□ 0.12
SMPD4-202ENST00000409031 PRAMEF25A6NGN4 478 aa15.79■□□□□ 0.12
SMPD4-202ENST00000409031 GEMIN2O14893 280 aaKnown RBP15.79■□□□□ 0.12
SMPD4-202ENST00000409031 ZNF737O75373 536 aa15.79■□□□□ 0.12
SMPD4-202ENST00000409031 CD160O95971 181 aa15.79■□□□□ 0.12
SMPD4-202ENST00000409031 TGFBR3Q03167 851 aa15.79■□□□□ 0.12
SMPD4-202ENST00000409031 KISS1Q15726 138 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms