RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ZNF684Q5T5D7 378 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 PLCXD3Q63HM9 321 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 C12orf73Q69YU5 71 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 KDM4DQ6B0I6 523 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 ZNF322Q6U7Q0 402 aaPredicted RBP7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 WDR86Q86TI4 376 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 ZNF573Q86YE8 665 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 SLC35F2Q8IXU6 374 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 TCEANCQ8N8B7 351 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 OR5A2Q8NGI9 324 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 OR8J1Q8NGP2 316 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 TBC1D15Q8TC07 691 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 NPRL2Q8WTW4 380 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 SSMEM1Q8WWF3 244 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 LRTOMTQ8WZ04 291 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 TMIGD2Q96BF3 282 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 CENPNQ96H22 339 aaPredicted RBP7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 RAB3IPQ96QF0 476 aaPredicted RBP7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 RBM4BQ9BQ04 359 aaKnown RBP7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 PRDM13Q9H4Q3 707 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 CNTD2Q9H8S5 307 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 PLEKHA1Q9HB21 404 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 GPR84Q9NQS5 396 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 ACOXLQ9NUZ1 547 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 CLN6Q9NWW5 311 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 RASL12Q9NYN1 266 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 GTF2A1LQ9UNN4 478 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 KLHDC2Q9Y2U9 406 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 SNX5Q9Y5X3 404 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 R4GMQ9 66 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 IGHV3OR15-7A0A075B7D8 119 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 TRBV23-1A0A0A0MS06 115 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 IGHV1-69DA0A0B4J2H0 117 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 BTBD17A6NE02 478 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 ZNF732B4DXR9 585 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 PRKYO43930 277 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 IGHV1-69P01742 117 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 OR2T7P0C7T2 308 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 ACKR3P25106 362 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 RBMXP38159 391 aaKnown RBP7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 TGM4P49221 684 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 GPM6AP51674 278 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 CAV3P56539 151 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 CXCR4P61073 352 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 SLC9A3R2Q15599 337 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 CLVS2Q5SYC1 327 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 AADACL4Q5VUY2 407 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 NCR3LG1Q68D85 454 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 STUMQ69YW2 141 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 ZFP1Q6P2D0 407 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 C16orf87Q6PH81 154 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 METAP1DQ6UB28 335 aaPredicted RBP7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 BRD3OSQ6XYD6 125 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 ZNF788Q6ZQV5 615 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 FAM220AQ7Z4H9 259 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 C11orf53Q8IXP5 236 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 BCL6BQ8N143 479 aaPredicted RBP7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 OR2T27Q8NH04 317 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 C8orf46Q8TAG6 207 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 OR51E1Q8TCB6 317 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 HPSE2Q8WWQ2 592 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 MRPL48Q96GC5 212 aaKnown RBP7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 LYZL4Q96KX0 146 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 ZNF48Q96MX3 618 aaPredicted RBP7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 CCL13Q99616 98 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 ADI1Q9BV57 179 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 ZNF747Q9BV97 191 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 GABARAPL3Q9BY60 117 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 SIRPDQ9H106 197 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 SMURF1Q9HCE7 757 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 ZNF319Q9P2F9 582 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 ONECUT1Q9UBC0 465 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 NLKQ9UBE8 527 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 SLC25A10Q9UBX3 287 aaPredicted RBP7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 PIGLQ9Y2B2 252 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 FAM96BQ9Y3D0 163 aa7.52□□□□□ -1.21
SNORD88A-201ENST00000408314 NBEAL1Q6ZS30 2694 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 CENPVL3A0A0U1RRI6 287 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 hCG_1809904A0A1W2PP81 198 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 A0A1W2PPE2 198 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 A0A1W2PQ09 198 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 A0A1W2PR64 198 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 A0A1W2PRV1 198 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 OR2AT4A6NND4 320 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 J3QT63 122 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 M0R1W7 72 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 SLC1A7O00341 560 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 DLGAP1O14490 977 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 SIGLEC5O15389 551 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 HOXA3O43365 443 aaPredicted RBP7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 GATBO75879 557 aaKnown RBP7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 SULT1C4O75897 302 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 NRASP01111 189 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 IGLV3-1P01715 115 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 FBP1P09467 338 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 MMP9P14780 707 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 HTR1FP30939 366 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 ARF6P62330 175 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 ACTC1P68032 377 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 ACTA1P68133 377 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms