RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 C17orf107Q6ZR85 190 aa11.88□□□□□ -0.51
CACNA1C-222ENST00000406454 CORO2AQ92828 525 aa11.88□□□□□ -0.51
CACNA1C-222ENST00000406454 WISP3O95389 354 aaPredicted RBP11.88□□□□□ -0.51
CACNA1C-222ENST00000406454 EML2O95834 649 aa11.88□□□□□ -0.51
CACNA1C-222ENST00000406454 GNG3P63215 75 aa11.88□□□□□ -0.51
CACNA1C-222ENST00000406454 BCL2L11O43521 198 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 HIST1H1DP16402 221 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 FPR2P25090 351 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 CD226Q15762 336 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 JMJD6Q6NYC1 403 aaPredicted RBP11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 RNF150Q9ULK6 438 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 SEC16AO15027 2179 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 GPR31O00270 319 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 SPINT1O43278 529 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 ADH4P08319 380 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 ZNF32P17041 273 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 GALNSP34059 522 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 ZNF774Q6NX45 483 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 OR10D3Q8NH80 312 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 C14orf79Q96F83 325 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 ADAT1Q9BUB4 502 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 TMEM265A0A087WTH1 108 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 FFAR1O14842 300 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 PNPP00491 289 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 ZFP62Q8NB50 900 aaPredicted RBP11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 ZNF485Q8NCK3 441 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 MTCH1Q9NZJ7 389 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 MTFP1Q9UDX5 166 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 GAB2Q9UQC2 676 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 CYR61O00622 381 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 SCGB1D1O95968 90 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 D2HGDHQ8N465 521 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 COMMD5Q9GZQ3 224 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 LAMP3Q9UQV4 416 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 CRXO43186 299 aaPredicted RBP11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 G0S2P27469 103 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 RAB13P51153 203 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 HAGHQ16775 308 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 Q8IYB0 196 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 OR52N4Q8NGI2 321 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 RCL1Q9Y2P8 373 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 AVPR2P30518 371 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 GNB1P62873 340 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 PABPC1L2AQ5JQF8 200 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 FAM74A1Q5RGS3 127 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 ATG4DQ86TL0 474 aaPredicted RBP11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 TMEM123Q8N131 208 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 OR10Z1Q8NGY1 313 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 ST8SIA2Q92186 375 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 GALMQ96C23 342 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 PLSCR3Q9NRY6 295 aa11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 ZNF275Q9NSD4 429 aaPredicted RBP11.87□□□□□ -0.51
CACNA1C-222ENST00000406454 UBE2IP63279 158 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 ARL16Q0P5N6 197 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 ZDHHC22Q8N966 263 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 ARHGAP5-AS1Q96IT6 56 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 SNRNP200O75643 2136 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 DBPQ10586 325 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 FOXC1Q12948 553 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 DMKNQ6E0U4 476 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 LHX4Q969G2 390 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 MED30Q96HR3 178 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 ACTR3CQ9C0K3 210 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 ZNF638Q14966 1978 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 UMAD1C9J7I0 102 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 H3BMH7 237 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 CTAG2O75638 210 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 SARGQ9BW04 601 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 TMEM231Q9H6L2 316 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 QPCTLQ9NXS2 382 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 URGCP-MRPS24S4R325 110 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 TMEM30CPA0ZSE6 113 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 RFPL4AA6NLU0 287 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 RFPL4AL1F8VTS6 287 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 PTGFRP43088 359 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 RPS16P62249 146 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 PDZK1IP1Q13113 114 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 WDR74Q6RFH5 385 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 GFRALQ6UXV0 394 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 LRRC3BQ96PB8 259 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 LHX9Q9NQ69 397 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 ADRB1P08588 477 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 SRSF5Q13243 272 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 OR2T2Q6IF00 324 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 PRSS42Q7Z5A4 293 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 BAGE3Q86Y29 109 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 BAGE2Q86Y30 109 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 DEFB124Q8NES8 71 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 OCIAD1Q9NX40 245 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 TUBAL3A6NHL2 446 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 CD37P11049 281 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 DTYMKP23919 212 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 HOXD11P31277 338 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 UBE2G1P62253 170 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 ALKBH6Q3KRA9 238 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 ZNF75AQ96N20 296 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 R4GN57 208 aa11.86□□□□□ -0.51
CACNA1C-222ENST00000406454 MPZL1O95297 269 aa11.85□□□□□ -0.51
CACNA1C-222ENST00000406454 C10orf111Q8N326 155 aa11.85□□□□□ -0.51
CACNA1C-222ENST00000406454 SMOC1Q9H4F8 434 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms