RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 CRYGSP22914 178 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 B3GALT5-AS1P59052 145 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 SLC9A3R2Q15599 337 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 TRIM61Q5EBN2 209 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 ZNF468Q5VIY5 522 aaPredicted RBP8.61□□□□□ -1.03
MSH2-202ENST00000406134 NSUN5P2Q63ZY6 315 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 TMEM200AQ86VY9 491 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 OR5L2Q8NGL0 311 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 GLS2Q9UI32 602 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 A0A0B4J2A0 478 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 A0A0G2JMM0 328 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 A0A1W2PPB8 328 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 A0A1W2PRS3 328 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 KIR3DP1A8MWS1 328 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 GPR31O00270 319 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 DHPSP49366 369 aaPredicted RBP8.6□□□□□ -1.03
MSH2-202ENST00000406134 SGCAQ16586 387 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 PUSL1Q8N0Z8 303 aaKnown RBP8.6□□□□□ -1.03
MSH2-202ENST00000406134 AQP10Q96PS8 301 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 USB1Q9BQ65 265 aaKnown RBP8.6□□□□□ -1.03
MSH2-202ENST00000406134 CHST5Q9GZS9 411 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 PRO3102Q9H379 93 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 RAB18Q9NP72 206 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 SHPKQ9UHJ6 478 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 AKR1C2P52895 323 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 GRB2P62993 217 aaKnown RBP8.6□□□□□ -1.03
MSH2-202ENST00000406134 NAAAQ02083 359 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 AKR1C1Q04828 323 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 GFOD2Q3B7J2 385 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 LDLRAD3Q86YD5 345 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 OR2AJ1Q8NGZ0 328 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 NPRL2Q8WTW4 380 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 SLC39A7Q92504 469 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 DCUN1D4Q92564 292 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 MARC2Q969Z3 335 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 GNRHR2Q96P88 292 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 NELFAQ9H3P2 528 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 IFT22Q9H7X7 185 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 SDHAF3Q9NRP4 125 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 TNRC6AQ8NDV7 1962 aaKnown RBP8.6□□□□□ -1.03
MSH2-202ENST00000406134 DHRS3O75911 302 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 ATG12O94817 140 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 LIFP15018 202 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 ZNF43P17038 809 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 MC2RQ01718 297 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 ECH1Q13011 328 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 TMEM41AQ96HV5 264 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 ANGPTL4Q9BY76 406 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 OR10A2Q9H208 303 aa8.6□□□□□ -1.03
MSH2-202ENST00000406134 SDK2Q58EX2 2172 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 TMEM218A2RU14 115 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 HCKP08631 526 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 FGF5P12034 268 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 AKR1D1P51857 326 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 PRSS54Q6PEW0 395 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 Q7L0L9 218 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 OR56B1Q8NGI3 324 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 SLC25A43Q8WUT9 341 aaPredicted RBP8.59□□□□□ -1.03
MSH2-202ENST00000406134 Q96M66 194 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 TAS2R3Q9NYW6 316 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 RARRES3Q9UL19 164 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 ARHGAP21Q5T5U3 1957 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 C13orf42A0A1B0GVH6 325 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 RAB19A4D1S5 217 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 STMND1H3BQB6 276 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 THBS4P35443 961 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 SNU13P55769 128 aaKnown RBP8.59□□□□□ -1.03
MSH2-202ENST00000406134 PRSS12P56730 875 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 TAS2R31P59538 309 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 POLR2GP62487 172 aaKnown RBP eCLIP8.59□□□□□ -1.03
MSH2-202ENST00000406134 RAB32Q13637 225 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 C6orf201Q7Z4U5 140 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 ADAMTS17Q8TE56 1095 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 HAS2Q92819 552 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 SGK3Q96BR1 496 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 MARS2Q96GW9 593 aaKnown RBP8.59□□□□□ -1.03
MSH2-202ENST00000406134 NKX6-2Q9C056 277 aaPredicted RBP8.59□□□□□ -1.03
MSH2-202ENST00000406134 ZNF700Q9H0M5 742 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 ASF1BQ9NVP2 202 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 COMMD9Q9P000 198 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 HS3ST3B1Q9Y662 390 aa8.59□□□□□ -1.03
MSH2-202ENST00000406134 F5H0A9 414 aaPredicted RBP8.59□□□□□ -1.04
MSH2-202ENST00000406134 SYNGR3O43761 229 aa8.59□□□□□ -1.04
MSH2-202ENST00000406134 HTR3BO95264 441 aa8.59□□□□□ -1.04
MSH2-202ENST00000406134 F12P00748 615 aaPredicted RBP8.59□□□□□ -1.04
MSH2-202ENST00000406134 CSTBP04080 98 aaKnown RBP8.59□□□□□ -1.04
MSH2-202ENST00000406134 ZNF708P17019 499 aa8.59□□□□□ -1.04
MSH2-202ENST00000406134 MSR1P21757 451 aa8.59□□□□□ -1.04
MSH2-202ENST00000406134 HFEQ30201 348 aa8.59□□□□□ -1.04
MSH2-202ENST00000406134 ACTBL2Q562R1 376 aa8.59□□□□□ -1.04
MSH2-202ENST00000406134 UQCC3Q6UW78 93 aa8.59□□□□□ -1.04
MSH2-202ENST00000406134 LRRC18Q8N456 261 aa8.59□□□□□ -1.04
MSH2-202ENST00000406134 ZNF283Q8N7M2 679 aa8.59□□□□□ -1.04
MSH2-202ENST00000406134 OR9K2Q8NGE7 335 aa8.59□□□□□ -1.04
MSH2-202ENST00000406134 THAP6Q8TBB0 222 aa8.59□□□□□ -1.04
MSH2-202ENST00000406134 PIGMQ9H3S5 423 aa8.59□□□□□ -1.04
MSH2-202ENST00000406134 WDR54Q9H977 334 aa8.59□□□□□ -1.04
MSH2-202ENST00000406134 WNT16Q9UBV4 365 aa8.59□□□□□ -1.04
MSH2-202ENST00000406134 A0A0J9YW62 118 aa8.58□□□□□ -1.04
MSH2-202ENST00000406134 RRP8O43159 456 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms