RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 CST4P01036 141 aa18.08■□□□□ 0.48
TPM1-208ENST00000404484 CECR9P0C854 216 aa18.08■□□□□ 0.48
TPM1-208ENST00000404484 PPP1CBP62140 327 aa18.08■□□□□ 0.48
TPM1-208ENST00000404484 MADCAM1Q13477 382 aa18.08■□□□□ 0.48
TPM1-208ENST00000404484 FBXW12Q6X9E4 464 aa18.08■□□□□ 0.48
TPM1-208ENST00000404484 COQ3Q9NZJ6 369 aa18.08■□□□□ 0.48
TPM1-208ENST00000404484 CD300LBA8K4G0 201 aa18.07■□□□□ 0.48
TPM1-208ENST00000404484 CLDN14O95500 239 aa18.07■□□□□ 0.48
TPM1-208ENST00000404484 CSF3P09919 207 aa18.07■□□□□ 0.48
TPM1-208ENST00000404484 ZNF35P13682 527 aa18.07■□□□□ 0.48
TPM1-208ENST00000404484 GRNP28799 593 aaKnown RBP18.07■□□□□ 0.48
TPM1-208ENST00000404484 RAD52P43351 418 aa18.07■□□□□ 0.48
TPM1-208ENST00000404484 ALDH3B1P43353 468 aa18.07■□□□□ 0.48
TPM1-208ENST00000404484 RBP2P50120 134 aa18.07■□□□□ 0.48
TPM1-208ENST00000404484 FUT6P51993 359 aa18.07■□□□□ 0.48
TPM1-208ENST00000404484 UCP2P55851 309 aa18.07■□□□□ 0.48
TPM1-208ENST00000404484 MRPS10P82664 201 aaKnown RBP18.07■□□□□ 0.48
TPM1-208ENST00000404484 HLXQ14774 488 aaPredicted RBP18.07■□□□□ 0.48
TPM1-208ENST00000404484 PPA1Q15181 289 aa18.07■□□□□ 0.48
TPM1-208ENST00000404484 BAK1Q16611 211 aa18.07■□□□□ 0.48
TPM1-208ENST00000404484 HACD4Q5VWC8 232 aa18.07■□□□□ 0.48
TPM1-208ENST00000404484 PLCXD3Q63HM9 321 aa18.07■□□□□ 0.48
TPM1-208ENST00000404484 RELL2Q8NC24 303 aaPredicted RBP18.07■□□□□ 0.48
TPM1-208ENST00000404484 C19orf18Q8NEA5 215 aa18.07■□□□□ 0.48
TPM1-208ENST00000404484 NPRL2Q8WTW4 380 aa18.07■□□□□ 0.48
TPM1-208ENST00000404484 PIGCQ92535 297 aa18.07■□□□□ 0.48
TPM1-208ENST00000404484 BORCS8Q96FH0 119 aa18.07■□□□□ 0.48
TPM1-208ENST00000404484 SPACA5Q96QH8 159 aa18.07■□□□□ 0.48
TPM1-208ENST00000404484 S100A13Q99584 98 aa18.07■□□□□ 0.48
TPM1-208ENST00000404484 C1QTNF6Q9BXI9 259 aa18.07■□□□□ 0.48
TPM1-208ENST00000404484 BCL2L14Q9BZR8 327 aa18.07■□□□□ 0.48
TPM1-208ENST00000404484 MRPS7Q9Y2R9 242 aaKnown RBP18.07■□□□□ 0.48
TPM1-208ENST00000404484 KLF2Q9Y5W3 355 aaPredicted RBP18.07■□□□□ 0.48
TPM1-208ENST00000404484 PKDREJQ9NTG1 2253 aa18.07■□□□□ 0.48
TPM1-208ENST00000404484 IGHV1-18A0A0C4DH31 117 aa18.06■□□□□ 0.48
TPM1-208ENST00000404484 METTL21EPA6NDL7 271 aa18.06■□□□□ 0.48
TPM1-208ENST00000404484 ANKRD30BLA7E2S9 258 aa18.06■□□□□ 0.48
TPM1-208ENST00000404484 PRSS44E7EML9 344 aa18.06■□□□□ 0.48
TPM1-208ENST00000404484 C16orf97H3BN30 126 aa18.06■□□□□ 0.48
TPM1-208ENST00000404484 XRCC3O43542 346 aa18.06■□□□□ 0.48
TPM1-208ENST00000404484 CTAG2O75638 210 aa18.06■□□□□ 0.48
TPM1-208ENST00000404484 SELEP16581 610 aa18.06■□□□□ 0.48
TPM1-208ENST00000404484 CDK2P24941 298 aa18.06■□□□□ 0.48
TPM1-208ENST00000404484 PTGFRP43088 359 aa18.06■□□□□ 0.48
TPM1-208ENST00000404484 INPP1P49441 399 aa18.06■□□□□ 0.48
TPM1-208ENST00000404484 MMP15P51511 669 aa18.06■□□□□ 0.48
TPM1-208ENST00000404484 MTCP1P56278 107 aa18.06■□□□□ 0.48
TPM1-208ENST00000404484 GLIPR1L1Q6UWM5 242 aa18.06■□□□□ 0.48
TPM1-208ENST00000404484 MOB3CQ70IA8 216 aa18.06■□□□□ 0.48
TPM1-208ENST00000404484 CA5BP1Q8WTZ4 195 aa18.06■□□□□ 0.48
TPM1-208ENST00000404484 CHPT1Q8WUD6 406 aa18.06■□□□□ 0.48
TPM1-208ENST00000404484 NKX3-1Q99801 234 aaPredicted RBP18.06■□□□□ 0.48
TPM1-208ENST00000404484 PAPOLGQ9BWT3 736 aaKnown RBP18.06■□□□□ 0.48
TPM1-208ENST00000404484 ATG5Q9H1Y0 275 aa18.06■□□□□ 0.48
TPM1-208ENST00000404484 POFUT1Q9H488 388 aa18.06■□□□□ 0.48
TPM1-208ENST00000404484 A0A1W2PQ09 198 aa18.05■□□□□ 0.48
TPM1-208ENST00000404484 HLA-DQB1P01920 261 aa18.05■□□□□ 0.48
TPM1-208ENST00000404484 RAC2P15153 192 aa18.05■□□□□ 0.48
TPM1-208ENST00000404484 CHRNB4P30926 498 aa18.05■□□□□ 0.48
TPM1-208ENST00000404484 OR3A4PP47883 348 aa18.05■□□□□ 0.48
TPM1-208ENST00000404484 ATP1B3P54709 279 aa18.05■□□□□ 0.48
TPM1-208ENST00000404484 PRSS12P56730 875 aa18.05■□□□□ 0.48
TPM1-208ENST00000404484 SP5Q6BEB4 398 aaPredicted RBP18.05■□□□□ 0.48
TPM1-208ENST00000404484 RAB12Q6IQ22 244 aa18.05■□□□□ 0.48
TPM1-208ENST00000404484 ZDHHC23Q8IYP9 409 aa18.05■□□□□ 0.48
TPM1-208ENST00000404484 POC5Q8NA72 575 aa18.05■□□□□ 0.48
TPM1-208ENST00000404484 LILRB4Q8NHJ6 448 aa18.05■□□□□ 0.48
TPM1-208ENST00000404484 KCNG3Q8TAE7 436 aa18.05■□□□□ 0.48
TPM1-208ENST00000404484 TNFAIP8L1Q8WVP5 186 aa18.05■□□□□ 0.48
TPM1-208ENST00000404484 ABHD1Q96SE0 405 aa18.05■□□□□ 0.48
TPM1-208ENST00000404484 CST11Q9H112 138 aa18.05■□□□□ 0.48
TPM1-208ENST00000404484 OR51B6Q9H340 312 aa18.05■□□□□ 0.48
TPM1-208ENST00000404484 UNC79Q9P2D8 2635 aa18.05■□□□□ 0.48
TPM1-208ENST00000404484 CELSR2Q9HCU4 2923 aa18.05■□□□□ 0.48
TPM1-208ENST00000404484 CYSRT1A8MQ03 144 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 FAM157BP0CG42 384 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 EFNB2P52799 333 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 FAM27E3Q08E93 113 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 TAB1Q15750 504 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 TRIM16LQ309B1 348 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 LIX1LQ8IVB5 337 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 DTX3Q8N9I9 347 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 OR1J1Q8NGS3 322 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 RFT1Q96AA3 541 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 HIST1H2AAQ96QV6 131 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 MPC1Q9Y5U8 109 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 NOTCH2Q04721 2471 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 IGHV2OR16-5A0A0B4J2B6 119 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 FAM230AA0A1W2PPH8 454 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 ZNF850A8MQ14 1090 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 TMEM14DPA8MWL7 114 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 GSTZ1O43708 216 aaPredicted RBP18.04■□□□□ 0.48
TPM1-208ENST00000404484 PTTG1O95997 202 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 VSIG8P0DPA2 414 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 NAT2P11245 290 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 TAS2R20P59543 309 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 QRFPP83859 136 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 PRDX4Q13162 271 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 IZUMO1Q8IYV9 350 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 FAM46BQ96A09 425 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms