RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 CCL13Q99616 98 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 MICU1Q9BPX6 476 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 NUDT16L1Q9BRJ7 211 aaKnown RBP4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 MRI1Q9BV20 369 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 OSBPL10Q9BXB5 764 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 GABARAPL3Q9BY60 117 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 MROQ9BYG7 248 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 PRRG3Q9BZD7 231 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 PBOV1Q9GZY1 135 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 WDR13Q9H1Z4 485 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 RGCCQ9H4X1 137 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 NIPAL2Q9H841 368 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 GPR84Q9NQS5 396 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 SNTG1Q9NSN8 517 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 H2AFY2Q9P0M6 372 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 AASSQ9UDR5 926 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 MRM2Q9UI43 246 aaKnown RBP4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 A0A0A6YYJ9 748 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 TRAV38-1A0A0B4J264 116 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 A0A0U1RQV5 110 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 KIR2DS1A0A191URI9 304 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 MDFIC2A0A1B0GVS7 189 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 A6NIN4 97 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 SLC22A31A6NKX4 558 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 ZNF670-ZNF695F2Z2N8 137 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 LOC110117498-PIK3R3F6TDL0 507 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 P2RY10O00398 339 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 DVL1O14640 695 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 EI24O14681 340 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 PHYHO14832 338 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 TMPRSS2O15393 492 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 AKR7A2O43488 359 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 ZNF254O75437 659 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 RHBDL1O75783 438 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 RPP14O95059 124 aaKnown RBP4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 FSTL3O95633 263 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 CST4P01036 141 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 TTRP02766 147 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 ALPLP05186 524 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 SFTPBP07988 381 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 SELLP14151 372 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 AMY2BP19961 511 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 FPR2P25090 351 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 HTR1FP30939 366 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 GPM6AP51674 278 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 FGF12P61328 243 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 IL5RAQ01344 420 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 MZT1Q08AG7 82 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 SCGB2A2Q13296 93 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 ODF4Q2M2E3 257 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 ZNF829Q3KNS6 432 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 WDR38Q5JTN6 314 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 BCL2L15Q5TBC7 163 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 TEX36Q5VZQ5 186 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 RUSC1-AS1Q66K80 236 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 DEGS2Q6QHC5 323 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 BRD3OSQ6XYD6 125 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 MOB3CQ70IA8 216 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 GID4Q8IVV7 300 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 ZDHHC23Q8IYP9 409 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 GALNT4Q8N4A0 578 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 TEX29Q8N6K0 151 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 FAM216BQ8N7L0 139 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 YIPF7Q8N8F6 280 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 ZDHHC22Q8N966 263 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 SCCPDHQ8NBX0 429 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 ASB17Q8WXJ9 295 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 OR5P3Q8WZ94 311 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 ST8SIA4Q92187 359 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 TAF15Q92804 592 aaKnown RBP eCLIP4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 EME1Q96AY2 570 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 RBM4BQ9BQ04 359 aaKnown RBP4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 PCGF1Q9BSM1 259 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 RTL8AQ9BWD3 113 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 SUCNR1Q9BXA5 334 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 TLNRD1Q9H1K6 362 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 RNPEPL1Q9HAU8 725 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 CLN6Q9NWW5 311 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 ERVK-18Q9QC07 812 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 NUFIP1Q9UHK0 495 aaKnown RBP4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 ENOPH1Q9UHY7 261 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 NUP50Q9UKX7 468 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 SLC22A13Q9Y226 551 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 PIGLQ9Y2B2 252 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 MPC1Q9Y5U8 109 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 TMEM14AQ9Y6G1 99 aa4.78□□□□□ -1.64
HMGB1P20-201ENST00000402555 PKD1L1Q8TDX9 2849 aa4.78□□□□□ -1.65
HMGB1P20-201ENST00000402555 KRTAP4-8A0A0G2JLE6 195 aa4.77□□□□□ -1.65
HMGB1P20-201ENST00000402555 ZNF816-ZNF321PA0A0X1KG74 233 aa4.77□□□□□ -1.65
HMGB1P20-201ENST00000402555 A0A1B0GTI1 187 aa4.77□□□□□ -1.65
HMGB1P20-201ENST00000402555 A0A1W2PQL4 384 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P20-201ENST00000402555 DNAJC9-AS1A6NH13 148 aa4.77□□□□□ -1.65
HMGB1P20-201ENST00000402555 ACOD1A6NK06 481 aa4.77□□□□□ -1.65
HMGB1P20-201ENST00000402555 TMEM210A6NLX4 147 aa4.77□□□□□ -1.65
HMGB1P20-201ENST00000402555 SRRM5B3KS81 715 aa4.77□□□□□ -1.65
HMGB1P20-201ENST00000402555 ZNF732B4DXR9 585 aa4.77□□□□□ -1.65
HMGB1P20-201ENST00000402555 TRIM77I1YAP6 450 aa4.77□□□□□ -1.65
HMGB1P20-201ENST00000402555 ENSAO43768 121 aaKnown RBP4.77□□□□□ -1.65
HMGB1P20-201ENST00000402555 ENTPD6O75354 484 aa4.77□□□□□ -1.65
HMGB1P20-201ENST00000402555 IGLV3-1P01715 115 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms