RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 LINC00477Q96M19 166 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 NAPGQ99747 312 aaPredicted RBP1.51□□□□□ -2.17
CD47-203ENST00000398258 GABRG3Q99928 467 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 SCRT1Q9BWW7 348 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 MAP1LC3CQ9BXW4 147 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 ZNF717Q9BY31 904 aaPredicted RBP1.51□□□□□ -2.17
CD47-203ENST00000398258 ADA2Q9NZK5 511 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 IFNKQ9P0W0 207 aa1.51□□□□□ -2.17
CD47-203ENST00000398258 COL27A1Q8IZC6 1860 aaPredicted RBP1.5□□□□□ -2.17
CD47-203ENST00000398258 IGLV2-18A0A075B6J9 118 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 BOLA2-SMG1P6H3BVE0 249 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 M0R1X1 148 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 CCDC22O60826 627 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 ALOX12BO75342 701 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 GATBO75879 557 aaKnown RBP1.5□□□□□ -2.17
CD47-203ENST00000398258 CYB5R3P00387 301 aaPredicted RBP1.5□□□□□ -2.17
CD47-203ENST00000398258 OR5AL1P0C617 328 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 ZNF806P0C7X5 589 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 NELFEP18615 380 aaKnown RBP1.5□□□□□ -2.17
CD47-203ENST00000398258 PSMB5P28074 263 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 MTPNP58546 118 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 PAFAH1B2P68402 229 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 ELF3P78545 371 aaPredicted RBP1.5□□□□□ -2.17
CD47-203ENST00000398258 WDR43Q15061 677 aaKnown RBP eCLIP1.5□□□□□ -2.17
CD47-203ENST00000398258 TOMM34Q15785 309 aaPredicted RBP1.5□□□□□ -2.17
CD47-203ENST00000398258 LY6EQ16553 131 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 RNF10Q8N5U6 811 aaKnown RBP1.5□□□□□ -2.17
CD47-203ENST00000398258 ZNF645Q8N7E2 425 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 SLC25A29Q8N8R3 303 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 OR51A7Q8NH64 312 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 OR1S1Q8NH92 325 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 CACNG8Q8WXS5 425 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 CDS1Q92903 461 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 MRPL48Q96GC5 212 aaKnown RBP1.5□□□□□ -2.17
CD47-203ENST00000398258 SNF8Q96H20 258 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 CENPNQ96H22 339 aaPredicted RBP1.5□□□□□ -2.17
CD47-203ENST00000398258 ZNF649Q9BS31 505 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 NUDT9Q9BW91 350 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 TM6SF2Q9BZW4 377 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 STMN4Q9H169 189 aaPredicted RBP1.5□□□□□ -2.17
CD47-203ENST00000398258 LZTFL1Q9NQ48 299 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 C21orf62Q9NYP8 219 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 CFL2Q9Y281 166 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 ZNF835Q9Y2P0 537 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 ACOT9Q9Y305 439 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 LRRC42Q9Y546 428 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 BZW2Q9Y6E2 419 aaKnown RBP1.5□□□□□ -2.17
CD47-203ENST00000398258 PCM1Q15154 2024 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 TUBGCP6Q96RT7 1819 aa1.5□□□□□ -2.17
CD47-203ENST00000398258 IGHV3OR16-8A0A075B7F1 116 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 TRAV8-4A0A0B4J246 113 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 E7EWF7 191 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 H7C2Y5 167 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 NDUFS8O00217 210 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 RFXANKO14593 260 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 PRMT5O14744 637 aaPredicted RBP1.49□□□□□ -2.17
CD47-203ENST00000398258 MYL12BO14950 172 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 POLR1CO15160 346 aaPredicted RBP1.49□□□□□ -2.17
CD47-203ENST00000398258 P01737 135 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 IL4P05112 153 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 MMP7P09237 267 aaPredicted RBP1.49□□□□□ -2.17
CD47-203ENST00000398258 NTF3P20783 257 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 PTNP21246 168 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 BGNP21810 368 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 IL3RAP26951 378 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 PRSS3P35030 304 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 RPL31P62899 125 aaKnown RBP1.49□□□□□ -2.17
CD47-203ENST00000398258 PITPNAQ00169 270 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 IGFBP7Q16270 282 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 CDNFQ49AH0 187 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 DNLZQ5SXM8 178 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 FAM27D1Q5T7N8 215 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 EPGNQ6UW88 154 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 Q6ZSR6 202 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 PID1Q7Z2X4 250 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 SETD3Q86TU7 594 aaPredicted RBP1.49□□□□□ -2.17
CD47-203ENST00000398258 CA13Q8N1Q1 262 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 ZCCHC24Q8N2G6 241 aaKnown RBP1.49□□□□□ -2.17
CD47-203ENST00000398258 SYS1Q8N2H4 156 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 ZNF561Q8N587 486 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 TMEM105Q8N8V8 129 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 ASCC1Q8N9N2 400 aaKnown RBP1.49□□□□□ -2.17
CD47-203ENST00000398258 APCDD1LQ8NCL9 501 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 OR2M7Q8NG81 312 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 OR5M1Q8NGP8 315 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 OR6N2Q8NGY6 317 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 OR52N1Q8NH53 320 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 KLF14Q8TD94 323 aaPredicted RBP1.49□□□□□ -2.17
CD47-203ENST00000398258 CPNE4Q96A23 557 aaPredicted RBP1.49□□□□□ -2.17
CD47-203ENST00000398258 IP6K3Q96PC2 410 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 ALS2CR12Q96Q35 445 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 SYT4Q9H2B2 425 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 STMN3Q9NZ72 180 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 NDRG2Q9UN36 371 aaKnown RBP1.49□□□□□ -2.17
CD47-203ENST00000398258 FLVCR2Q9UPI3 526 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 SLC7A11Q9UPY5 501 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 NUP214P35658 2090 aaPredicted RBP1.49□□□□□ -2.17
CD47-203ENST00000398258 ANKRD12Q6UB98 2062 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 DOCK8Q8NF50 2099 aa1.49□□□□□ -2.17
CD47-203ENST00000398258 YEATS2Q9ULM3 1422 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms