RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 CDIPTO14735 213 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 SERPINA3P01011 423 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 HTR1AP08908 422 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 RPS2P15880 293 aaKnown RBP11.95□□□□□ -0.5
HDDC2-202ENST00000398153 FAHP16930 419 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 PSMB10P40306 273 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 OR12D2P58182 307 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 SCGB2A2Q13296 93 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 MED21Q13503 144 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 MICBQ29980 383 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 WDR38Q5JTN6 314 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 LHFPL3Q86UP9 236 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 PRSS35Q8N3Z0 413 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 OR8B3Q8NGG8 313 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 OR52I1Q8NGK6 324 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 ZNF671Q8TAW3 534 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 HPSE2Q8WWQ2 592 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 PELI1Q96FA3 418 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 C4orf36Q96KX1 117 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 OR8B2Q96RD0 313 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 ZNF649Q9BS31 505 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 SSBP3Q9BWW4 388 aaPredicted RBP11.95□□□□□ -0.5
HDDC2-202ENST00000398153 VCX3BQ9H321 246 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 PLEKHA1Q9HB21 404 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 FRRS1LQ9P0K9 344 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 KAAG1Q9UBP8 84 aa11.95□□□□□ -0.5
HDDC2-202ENST00000398153 SRRM5B3KS81 715 aa11.94□□□□□ -0.5
HDDC2-202ENST00000398153 H0YHG0 523 aa11.94□□□□□ -0.5
HDDC2-202ENST00000398153 J3QLW9 94 aa11.94□□□□□ -0.5
HDDC2-202ENST00000398153 TNFRSF13BO14836 293 aaPredicted RBP11.94□□□□□ -0.5
HDDC2-202ENST00000398153 ZNF19P17023 458 aa11.94□□□□□ -0.5
HDDC2-202ENST00000398153 SRD5A1P18405 259 aa11.94□□□□□ -0.5
HDDC2-202ENST00000398153 GPM6AP51674 278 aa11.94□□□□□ -0.5
HDDC2-202ENST00000398153 CSNK2BP67870 215 aa11.94□□□□□ -0.5
HDDC2-202ENST00000398153 DCAF12L2Q5VW00 463 aa11.94□□□□□ -0.5
HDDC2-202ENST00000398153 PLCXD3Q63HM9 321 aa11.94□□□□□ -0.5
HDDC2-202ENST00000398153 ZNF826PQ6ZT77 177 aa11.94□□□□□ -0.5
HDDC2-202ENST00000398153 KCTD8Q6ZWB6 473 aa11.94□□□□□ -0.5
HDDC2-202ENST00000398153 MOB3CQ70IA8 216 aa11.94□□□□□ -0.5
HDDC2-202ENST00000398153 ZNF573Q86YE8 665 aa11.94□□□□□ -0.5
HDDC2-202ENST00000398153 SCCPDHQ8NBX0 429 aa11.94□□□□□ -0.5
HDDC2-202ENST00000398153 FBLIM1Q8WUP2 373 aa11.94□□□□□ -0.5
HDDC2-202ENST00000398153 LRRC29Q8WV35 223 aa11.94□□□□□ -0.5
HDDC2-202ENST00000398153 PP6455Q8WZ26 134 aa11.94□□□□□ -0.5
HDDC2-202ENST00000398153 TFAP2CQ92754 450 aa11.94□□□□□ -0.5
HDDC2-202ENST00000398153 RNF166Q96A37 237 aaPredicted RBP11.94□□□□□ -0.5
HDDC2-202ENST00000398153 DNTTIP1Q9H147 329 aa11.94□□□□□ -0.5
HDDC2-202ENST00000398153 OR51I2Q9H344 312 aa11.94□□□□□ -0.5
HDDC2-202ENST00000398153 PPP1R3EQ9H7J1 279 aa11.94□□□□□ -0.5
HDDC2-202ENST00000398153 LPAR2Q9HBW0 351 aa11.94□□□□□ -0.5
HDDC2-202ENST00000398153 NKX1-2Q9UD57 310 aaPredicted RBP11.94□□□□□ -0.5
HDDC2-202ENST00000398153 ANKRD61A6NGH8 418 aa11.93□□□□□ -0.5
HDDC2-202ENST00000398153 ZNF732B4DXR9 585 aa11.93□□□□□ -0.5
HDDC2-202ENST00000398153 GATBO75879 557 aaKnown RBP11.93□□□□□ -0.5
HDDC2-202ENST00000398153 ZNF205O95201 554 aa11.93□□□□□ -0.5
HDDC2-202ENST00000398153 CLIC3O95833 236 aa11.93□□□□□ -0.5
HDDC2-202ENST00000398153 ACAA1P09110 424 aaPredicted RBP11.93□□□□□ -0.5
HDDC2-202ENST00000398153 CCDC159P0C7I6 412 aa11.93□□□□□ -0.5
HDDC2-202ENST00000398153 PIPP12273 146 aaPredicted RBP11.93□□□□□ -0.5
HDDC2-202ENST00000398153 TGM4P49221 684 aa11.93□□□□□ -0.5
HDDC2-202ENST00000398153 GBX2P52951 348 aaPredicted RBP11.93□□□□□ -0.5
HDDC2-202ENST00000398153 GNB2P62879 340 aa11.93□□□□□ -0.5
HDDC2-202ENST00000398153 LCN2P80188 198 aa11.93□□□□□ -0.5
HDDC2-202ENST00000398153 ALKBH1Q13686 389 aaKnown RBP11.93□□□□□ -0.5
HDDC2-202ENST00000398153 SMN1Q16637 294 aaKnown RBP11.93□□□□□ -0.5
HDDC2-202ENST00000398153 CCDC58Q4VC31 144 aa11.93□□□□□ -0.5
HDDC2-202ENST00000398153 CEP78Q5JTW2 689 aa11.93□□□□□ -0.5
HDDC2-202ENST00000398153 FAM201AQ5SY85 155 aa11.93□□□□□ -0.5
HDDC2-202ENST00000398153 FAHD2BQ6P2I3 314 aaPredicted RBP11.93□□□□□ -0.5
HDDC2-202ENST00000398153 TMPRSS11AQ6ZMR5 421 aa11.93□□□□□ -0.5
HDDC2-202ENST00000398153 CNIH3Q8TBE1 160 aa11.93□□□□□ -0.5
HDDC2-202ENST00000398153 FAHD2AQ96GK7 314 aa11.93□□□□□ -0.5
HDDC2-202ENST00000398153 CHST5Q9GZS9 411 aa11.93□□□□□ -0.5
HDDC2-202ENST00000398153 PLCXD1Q9NUJ7 323 aa11.93□□□□□ -0.5
HDDC2-202ENST00000398153 RASL12Q9NYN1 266 aa11.93□□□□□ -0.5
HDDC2-202ENST00000398153 CNOT2Q9NZN8 540 aaKnown RBP11.93□□□□□ -0.5
HDDC2-202ENST00000398153 ERVK-18Q9QC07 812 aa11.93□□□□□ -0.5
HDDC2-202ENST00000398153 CLN8Q9UBY8 286 aa11.93□□□□□ -0.5
HDDC2-202ENST00000398153 OR5V1Q9UGF6 321 aa11.93□□□□□ -0.5
HDDC2-202ENST00000398153 HHLA2Q9UM44 414 aa11.93□□□□□ -0.5
HDDC2-202ENST00000398153 DIMT1Q9UNQ2 313 aaKnown RBP11.93□□□□□ -0.5
HDDC2-202ENST00000398153 SLC7A11Q9UPY5 501 aa11.93□□□□□ -0.5
HDDC2-202ENST00000398153 CAB39Q9Y376 341 aaPredicted RBP11.93□□□□□ -0.5
HDDC2-202ENST00000398153 EXOSC1Q9Y3B2 195 aaKnown RBP11.93□□□□□ -0.5
HDDC2-202ENST00000398153 MXRA5Q9NR99 2828 aa11.93□□□□□ -0.5
HDDC2-202ENST00000398153 LOC107986453A0A1B0GWG9 222 aa11.92□□□□□ -0.5
HDDC2-202ENST00000398153 EFCAB10A6NFE3 127 aa11.92□□□□□ -0.5
HDDC2-202ENST00000398153 TMEM212A6NML5 194 aa11.92□□□□□ -0.5
HDDC2-202ENST00000398153 KIAA1324LA8MWY0 1029 aaPredicted RBP11.92□□□□□ -0.5
HDDC2-202ENST00000398153 C3orf80F5H4A9 247 aa11.92□□□□□ -0.5
HDDC2-202ENST00000398153 GPR37O15354 613 aa11.92□□□□□ -0.5
HDDC2-202ENST00000398153 LIMS3P0CW19 117 aa11.92□□□□□ -0.5
HDDC2-202ENST00000398153 LIMS4P0CW20 117 aa11.92□□□□□ -0.5
HDDC2-202ENST00000398153 PPIAL4GP0DN37 164 aa11.92□□□□□ -0.5
HDDC2-202ENST00000398153 MYL12AP19105 171 aa11.92□□□□□ -0.5
HDDC2-202ENST00000398153 ZFP36P26651 326 aaKnown RBP11.92□□□□□ -0.5
HDDC2-202ENST00000398153 KIR3DL2P43630 455 aa11.92□□□□□ -0.5
HDDC2-202ENST00000398153 PITPNBP48739 271 aa11.92□□□□□ -0.5
HDDC2-202ENST00000398153 HNRNPA0Q13151 305 aaKnown RBP11.92□□□□□ -0.5
HDDC2-202ENST00000398153 RIPK1Q13546 671 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms