RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 COQ2Q96H96 371 aa5.85□□□□□ -1.47
TM9SF4-202ENST00000398022 PRSS16Q9NQE7 514 aa5.85□□□□□ -1.47
TM9SF4-202ENST00000398022 SLC2A4RGQ9NR83 387 aa5.85□□□□□ -1.47
TM9SF4-202ENST00000398022 PLAGL1Q9UM63 463 aa5.85□□□□□ -1.47
TM9SF4-202ENST00000398022 MTCL1Q9Y4B5 1905 aaKnown RBP5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 IGHV2-70DA0A0C4DH43 119 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 A0A1W2PP55 124 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 C5orf67F2Z3F1 127 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 H0YIG0 161 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 MMP23AO75900 390 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 MT-ND4LP03901 98 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 OR12D1P0DN82 309 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 GDF1P27539 372 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 CCKARP32238 428 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 CAMPP49913 170 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 TMEM211Q6ICI0 200 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 BCDIN3DQ7Z5W3 292 aaKnown RBP5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 SIAH3Q8IW03 269 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 ZNF738Q8NE65 137 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 DUSP18Q8NEJ0 188 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 NUP43Q8NFH3 380 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 OR14L1PQ8NHC6 308 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 SLC6A18Q96N87 628 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 OR5B12Q96R08 314 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 OR7D2Q96RA2 312 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 GPR174Q9BXC1 333 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 OR51I1Q9H343 314 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 TBC1D17Q9HA65 648 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 PELI2Q9HAT8 420 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 MRPS18AQ9NVS2 196 aaKnown RBP5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 B3GAT1Q9P2W7 334 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 TESQ9UGI8 421 aaKnown RBP5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 WDR45Q9Y484 360 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 TRAV8-7A0A075B6U6 113 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 TRAV39A0A0B4J263 110 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 FAM90A18PA6NE21 464 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 FAM90A16PA6NEW6 464 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 FAM90A9PA6NNJ1 464 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 FAM90A5PA8MXJ8 464 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 F5H768 121 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 HMGN4O00479 90 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 OR7C2O60412 319 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 OR2J3O76001 311 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 VENTXO95231 258 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 FAM90A15PP0C7V4 464 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 FAM90A14PP0C7W9 464 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 CLDN20P56880 219 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 FOXE3Q13461 319 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 ZSWIM7Q19AV6 140 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 ENTPD8Q5MY95 495 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 AWAT2Q6E213 333 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 PDZD9Q8IXQ8 264 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 APOBEC4Q8WW27 367 aaKnown RBP5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 FAM3CQ92520 227 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 VN1R3Q9BXE9 311 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 TMPRSS13Q9BYE2 586 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 METTL17Q9H7H0 456 aaPredicted RBP5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 TECTAO75443 2155 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 A0A1W2PPE3 182 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 SMIM9A6NGZ8 99 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 COLCA2A8K830 154 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 PLA2G10O15496 165 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 NDUFS4O43181 175 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 LATO43561 262 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 HLA-DQB1P01920 261 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 DBHP09172 617 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 CELP19835 753 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 EDN2P20800 178 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 CCKBRP32239 447 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 PIGPP57054 158 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 DEFB103AP81534 67 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 CDK5Q00535 292 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 PAX2Q02962 417 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 ST3GAL3Q11203 375 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 FAAP20Q6NZ36 180 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 PAMR1Q6UXH9 720 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 ZNF664Q8N3J9 261 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 CASTOR1Q8WTX7 329 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 ASB13Q8WXK3 278 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 PIGCQ92535 297 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 SEH1LQ96EE3 360 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 CXorf58Q96LI9 332 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 ARHGAP9Q9BRR9 750 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 SMCO4Q9NRQ5 59 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 MYOTQ9UBF9 498 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 A4GNTQ9UNA3 340 aa5.84□□□□□ -1.47
TM9SF4-202ENST00000398022 RIF1Q5UIP0 2472 aaKnown RBP5.84□□□□□ -1.48
TM9SF4-202ENST00000398022 LOC100509620A0A075B734 347 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 TSPAN11A1L157 253 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 ZNF726A6NNF4 738 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 C21orf140B9A014 251 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 PLPP1O14494 284 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 TOX4O94842 621 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 EPXP11678 715 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 ZBTB25P24278 435 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 SSR2P43308 183 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 BTG1P62324 171 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 HERPUD1Q15011 391 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 POM121L1PQ3SYA9 428 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 KHDC1LQ5JSQ8 128 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms