RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 RPSAP08865 295 aaKnown RBP11.59□□□□□ -0.55
SEC13-204ENST00000397099 RBMXP38159 391 aaKnown RBP11.59□□□□□ -0.55
SEC13-204ENST00000397099 SNRPGP62308 76 aaKnown RBP11.59□□□□□ -0.55
SEC13-204ENST00000397099 LRRC10Q5BKY1 277 aa11.59□□□□□ -0.55
SEC13-204ENST00000397099 CLVS2Q5SYC1 327 aa11.59□□□□□ -0.55
SEC13-204ENST00000397099 ZNF684Q5T5D7 378 aa11.59□□□□□ -0.55
SEC13-204ENST00000397099 Q6ZSR3 168 aa11.59□□□□□ -0.55
SEC13-204ENST00000397099 WDR86Q86TI4 376 aa11.59□□□□□ -0.55
SEC13-204ENST00000397099 ELMOD2Q8IZ81 293 aa11.59□□□□□ -0.55
SEC13-204ENST00000397099 SCCPDHQ8NBX0 429 aa11.59□□□□□ -0.55
SEC13-204ENST00000397099 RASL12Q9NYN1 266 aa11.59□□□□□ -0.55
SEC13-204ENST00000397099 DNAJB11Q9UBS4 358 aa11.59□□□□□ -0.55
SEC13-204ENST00000397099 PIGLQ9Y2B2 252 aa11.59□□□□□ -0.55
SEC13-204ENST00000397099 NKX6-3A6NJ46 265 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 ZNF879B4DU55 563 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 H3BNX3 289 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 M0R129 80 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 DVL1O14640 695 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 EI24O14681 340 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 NDUFB3O43676 98 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 PLATP00750 562 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 NRASP01111 189 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 TTRP02766 147 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 GPM6AP51674 278 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 CSNK2BP67870 215 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 PDCD1Q15116 288 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 OCLNQ16625 522 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 KLF17Q5JT82 389 aaPredicted RBP11.58□□□□□ -0.56
SEC13-204ENST00000397099 GPR157Q5UAW9 335 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 METTL11BQ5VVY1 283 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 FAM220AQ7Z4H9 259 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 BCDIN3DQ7Z5W3 292 aaKnown RBP11.58□□□□□ -0.56
SEC13-204ENST00000397099 ZNF573Q86YE8 665 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 YIPF7Q8N8F6 280 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 GCDHQ92947 438 aaPredicted RBP11.58□□□□□ -0.56
SEC13-204ENST00000397099 EME1Q96AY2 570 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 C10orf35Q96D05 121 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 FAM71F1Q96KD3 344 aaPredicted RBP11.58□□□□□ -0.56
SEC13-204ENST00000397099 Q96MT0 163 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 APOL4Q9BPW4 351 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 CTSZQ9UBR2 303 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 MRM2Q9UI43 246 aaKnown RBP11.58□□□□□ -0.56
SEC13-204ENST00000397099 GTF2A1LQ9UNN4 478 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 V9GYS6 101 aa11.58□□□□□ -0.56
SEC13-204ENST00000397099 A0A1W2PQL4 384 aaPredicted RBP11.57□□□□□ -0.56
SEC13-204ENST00000397099 ZNF732B4DXR9 585 aa11.57□□□□□ -0.56
SEC13-204ENST00000397099 CLDN34H7C241 214 aa11.57□□□□□ -0.56
SEC13-204ENST00000397099 CCL1P22362 96 aa11.57□□□□□ -0.56
SEC13-204ENST00000397099 POLR2IP36954 125 aaKnown RBP11.57□□□□□ -0.56
SEC13-204ENST00000397099 COMPP49747 757 aaPredicted RBP11.57□□□□□ -0.56
SEC13-204ENST00000397099 FGF12P61328 243 aa11.57□□□□□ -0.56
SEC13-204ENST00000397099 WDR38Q5JTN6 314 aa11.57□□□□□ -0.56
SEC13-204ENST00000397099 PLCXD3Q63HM9 321 aa11.57□□□□□ -0.56
SEC13-204ENST00000397099 TMEM42Q69YG0 159 aa11.57□□□□□ -0.56
SEC13-204ENST00000397099 STUMQ69YW2 141 aa11.57□□□□□ -0.56
SEC13-204ENST00000397099 CMTM4Q8IZR5 234 aa11.57□□□□□ -0.56
SEC13-204ENST00000397099 KIR3DL3Q8N743 410 aa11.57□□□□□ -0.56
SEC13-204ENST00000397099 C19orf18Q8NEA5 215 aa11.57□□□□□ -0.56
SEC13-204ENST00000397099 OR10H4Q8NGA5 316 aa11.57□□□□□ -0.56
SEC13-204ENST00000397099 HPSE2Q8WWQ2 592 aa11.57□□□□□ -0.56
SEC13-204ENST00000397099 C22orf15Q8WYQ4 148 aa11.57□□□□□ -0.56
SEC13-204ENST00000397099 RPL3LQ92901 407 aaKnown RBP11.57□□□□□ -0.56
SEC13-204ENST00000397099 ADI1Q9BV57 179 aa11.57□□□□□ -0.56
SEC13-204ENST00000397099 OR51I2Q9H344 312 aa11.57□□□□□ -0.56
SEC13-204ENST00000397099 ZNF69Q9UC07 566 aa11.57□□□□□ -0.56
SEC13-204ENST00000397099 POLDIP2Q9Y2S7 368 aa11.57□□□□□ -0.56
SEC13-204ENST00000397099 KPTNQ9Y664 436 aa11.57□□□□□ -0.56
SEC13-204ENST00000397099 A0A1B0GVI7 797 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 PRR32B1ATL7 298 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 C22orf46C9J442 243 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.56□□□□□ -0.56
SEC13-204ENST00000397099 TOX4O94842 621 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 SERPINA3P01011 423 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 ACAA1P09110 424 aaPredicted RBP11.56□□□□□ -0.56
SEC13-204ENST00000397099 UBCP0CG48 685 aaKnown RBP11.56□□□□□ -0.56
SEC13-204ENST00000397099 FAHP16930 419 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 EGR1P18146 543 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 GLRA1P23415 457 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 PRTN3P24158 256 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 TGM4P49221 684 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 ACTA2P62736 377 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 ACTG2P63267 376 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 IL13RA1P78552 427 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 MFGE8Q08431 387 aaPredicted RBP11.56□□□□□ -0.56
SEC13-204ENST00000397099 CEP78Q5JTW2 689 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 MOB3CQ70IA8 216 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 BTN2A1Q7KYR7 527 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 CBR4Q8N4T8 237 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 HAVCR2Q8TDQ0 301 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 ST8SIA4Q92187 359 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 SLC25A28Q96A46 364 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 TMIGD2Q96BF3 282 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 RDH12Q96NR8 316 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 WDFY2Q96P53 400 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 CNTD2Q9H8S5 307 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 PLEKHA1Q9HB21 404 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 S100A14Q9HCY8 104 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 C8orf4Q9NR00 106 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 NLKQ9UBE8 527 aa11.56□□□□□ -0.56
SEC13-204ENST00000397099 RPUSD1Q9UJJ7 312 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms