RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 EMG1Q92979 244 aaKnown RBP13.79□□□□□ -0.2
HOXA3-202ENST00000396352 GHRLQ9UBU3 117 aa13.79□□□□□ -0.2
HOXA3-202ENST00000396352 STMND1H3BQB6 276 aa13.78□□□□□ -0.2
HOXA3-202ENST00000396352 LRP3O75074 770 aa13.78□□□□□ -0.2
HOXA3-202ENST00000396352 CAV2P51636 162 aa13.78□□□□□ -0.2
HOXA3-202ENST00000396352 S100A10P60903 97 aa13.78□□□□□ -0.2
HOXA3-202ENST00000396352 SURF2Q15527 256 aaPredicted RBP13.78□□□□□ -0.2
HOXA3-202ENST00000396352 ZNF528Q3MIS6 628 aa13.78□□□□□ -0.2
HOXA3-202ENST00000396352 SLC16A14Q7RTX9 510 aa13.78□□□□□ -0.2
HOXA3-202ENST00000396352 TM2D1Q9BX74 207 aa13.78□□□□□ -0.2
HOXA3-202ENST00000396352 GSKIPQ9P0R6 139 aa13.78□□□□□ -0.2
HOXA3-202ENST00000396352 CA14Q9ULX7 337 aa13.78□□□□□ -0.2
HOXA3-202ENST00000396352 V9GYS6 101 aa13.78□□□□□ -0.2
HOXA3-202ENST00000396352 ASCC3Q8N3C0 2202 aaKnown RBP13.78□□□□□ -0.2
HOXA3-202ENST00000396352 SERPINA2P20848 420 aa13.78□□□□□ -0.2
HOXA3-202ENST00000396352 TMEM176BQ3YBM2 270 aaPredicted RBP13.78□□□□□ -0.2
HOXA3-202ENST00000396352 CPEB2Q7Z5Q1 589 aaKnown RBP13.78□□□□□ -0.2
HOXA3-202ENST00000396352 PGAM5Q96HS1 289 aa13.78□□□□□ -0.2
HOXA3-202ENST00000396352 SHDQ96IW2 340 aa13.78□□□□□ -0.2
HOXA3-202ENST00000396352 TAF9BQ9HBM6 251 aa13.78□□□□□ -0.2
HOXA3-202ENST00000396352 WDR87Q6ZQQ6 2873 aa13.78□□□□□ -0.2
HOXA3-202ENST00000396352 LOC102725191A0A1B0GVB3 256 aa13.77□□□□□ -0.2
HOXA3-202ENST00000396352 ZNF726A6NNF4 738 aa13.77□□□□□ -0.2
HOXA3-202ENST00000396352 SERPINE3A8MV23 424 aa13.77□□□□□ -0.2
HOXA3-202ENST00000396352 ZNF708P17019 499 aa13.77□□□□□ -0.2
HOXA3-202ENST00000396352 RBM39Q14498 530 aaKnown RBP13.77□□□□□ -0.2
HOXA3-202ENST00000396352 OR6C1Q96RD1 312 aa13.77□□□□□ -0.2
HOXA3-202ENST00000396352 PLA2G2EQ9NZK7 142 aa13.77□□□□□ -0.2
HOXA3-202ENST00000396352 MCTS1Q9ULC4 181 aaKnown RBP13.77□□□□□ -0.2
HOXA3-202ENST00000396352 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.77□□□□□ -0.21
HOXA3-202ENST00000396352 MSTNO14793 375 aa13.77□□□□□ -0.21
HOXA3-202ENST00000396352 ZFAND5O76080 213 aa13.77□□□□□ -0.21
HOXA3-202ENST00000396352 KNG1P01042 644 aa13.77□□□□□ -0.21
HOXA3-202ENST00000396352 FAHP16930 419 aa13.77□□□□□ -0.21
HOXA3-202ENST00000396352 THBS4P35443 961 aa13.77□□□□□ -0.21
HOXA3-202ENST00000396352 RFC3P40938 356 aa13.77□□□□□ -0.21
HOXA3-202ENST00000396352 PHYHD1Q5SRE7 291 aa13.77□□□□□ -0.21
HOXA3-202ENST00000396352 FADS6Q8N9I5 356 aa13.77□□□□□ -0.21
HOXA3-202ENST00000396352 DHRS3O75911 302 aa13.77□□□□□ -0.21
HOXA3-202ENST00000396352 RAB13P51153 203 aa13.77□□□□□ -0.21
HOXA3-202ENST00000396352 CLDN17P56750 224 aa13.77□□□□□ -0.21
HOXA3-202ENST00000396352 LSM6P62312 80 aaKnown RBP13.77□□□□□ -0.21
HOXA3-202ENST00000396352 RSPO1Q2MKA7 263 aaPredicted RBP13.77□□□□□ -0.21
HOXA3-202ENST00000396352 CHRFAM7AQ494W8 412 aa13.77□□□□□ -0.21
HOXA3-202ENST00000396352 TMEM268Q5VZI3 342 aa13.77□□□□□ -0.21
HOXA3-202ENST00000396352 OR2A2Q6IF42 318 aa13.77□□□□□ -0.21
HOXA3-202ENST00000396352 NECAB3Q96P71 396 aaPredicted RBP13.77□□□□□ -0.21
HOXA3-202ENST00000396352 HDGFL3Q9Y3E1 203 aa13.77□□□□□ -0.21
HOXA3-202ENST00000396352 CABIN1Q9Y6J0 2220 aa13.76□□□□□ -0.21
HOXA3-202ENST00000396352 A0A0U1RQV5 110 aa13.76□□□□□ -0.21
HOXA3-202ENST00000396352 TAAR5O14804 337 aa13.76□□□□□ -0.21
HOXA3-202ENST00000396352 IFNA2P01563 188 aa13.76□□□□□ -0.21
HOXA3-202ENST00000396352 HEXAP06865 529 aa13.76□□□□□ -0.21
HOXA3-202ENST00000396352 SFTPBP07988 381 aa13.76□□□□□ -0.21
HOXA3-202ENST00000396352 NFYBP25208 207 aa13.76□□□□□ -0.21
HOXA3-202ENST00000396352 HOXA1P49639 335 aaPredicted RBP13.76□□□□□ -0.21
HOXA3-202ENST00000396352 ENDOGQ14249 297 aaKnown RBP13.76□□□□□ -0.21
HOXA3-202ENST00000396352 ZNF385CQ66K41 422 aaPredicted RBP13.76□□□□□ -0.21
HOXA3-202ENST00000396352 SLC25A43Q8WUT9 341 aaPredicted RBP13.76□□□□□ -0.21
HOXA3-202ENST00000396352 CPNE2Q96FN4 548 aaPredicted RBP13.76□□□□□ -0.21
HOXA3-202ENST00000396352 RASL10BQ96S79 203 aa13.76□□□□□ -0.21
HOXA3-202ENST00000396352 SPSB2Q99619 263 aa13.76□□□□□ -0.21
HOXA3-202ENST00000396352 CHST5Q9GZS9 411 aa13.76□□□□□ -0.21
HOXA3-202ENST00000396352 ZNF160Q9HCG1 818 aa13.76□□□□□ -0.21
HOXA3-202ENST00000396352 DHRS7CA6NNS2 312 aa13.76□□□□□ -0.21
HOXA3-202ENST00000396352 SCRG1O75711 98 aa13.76□□□□□ -0.21
HOXA3-202ENST00000396352 FCGR2AP12318 317 aa13.76□□□□□ -0.21
HOXA3-202ENST00000396352 LCN10Q6JVE6 187 aa13.76□□□□□ -0.21
HOXA3-202ENST00000396352 FOXRED2Q8IWF2 684 aa13.76□□□□□ -0.21
HOXA3-202ENST00000396352 SPACA9Q96E40 222 aaPredicted RBP13.76□□□□□ -0.21
HOXA3-202ENST00000396352 CNTNAP3Q9BZ76 1288 aa13.76□□□□□ -0.21
HOXA3-202ENST00000396352 ZFP57Q9NU63 452 aa13.76□□□□□ -0.21
HOXA3-202ENST00000396352 ZNF701Q9NV72 531 aaPredicted RBP13.76□□□□□ -0.21
HOXA3-202ENST00000396352 C14orf166Q9Y224 244 aaKnown RBP13.76□□□□□ -0.21
HOXA3-202ENST00000396352 OR5H15A6NDH6 313 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 PCP4L1A6NKN8 68 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 TOX3O15405 576 aaPredicted RBP13.75□□□□□ -0.21
HOXA3-202ENST00000396352 MED6O75586 246 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 FARS2O95363 451 aaKnown RBP13.75□□□□□ -0.21
HOXA3-202ENST00000396352 FCGR3AP08637 254 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 MSR1P21757 451 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 BTNL8Q6UX41 500 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 Q6ZSR3 168 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 C6orf201Q7Z4U5 140 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 SEMA6DQ8NFY4 1073 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 HAS2Q92819 552 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 NABP1Q96AH0 204 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 C1orf123Q9NWV4 160 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 MEMO1Q9Y316 297 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 FAM157AC9JC47 383 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 F5H5K5 113 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 CA11O75493 328 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 SULT1A2P50226 295 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 SLC22A8Q8TCC7 542 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 ESRP2Q9H6T0 727 aaKnown RBP13.75□□□□□ -0.21
HOXA3-202ENST00000396352 CHCHD2Q9Y6H1 151 aaPredicted RBP13.75□□□□□ -0.21
HOXA3-202ENST00000396352 SERPINA5P05154 406 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 CD5P06127 495 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 SFTA3P0C7M3 94 aa13.75□□□□□ -0.21
HOXA3-202ENST00000396352 NME2P22392 152 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms