RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 PRKACBP22694 351 aa14.64□□□□□ -0.07
NUP50-202ENST00000396096 IL13RA1P78552 427 aa14.64□□□□□ -0.07
NUP50-202ENST00000396096 ARFRP1Q13795 201 aa14.64□□□□□ -0.07
NUP50-202ENST00000396096 STK11Q15831 433 aa14.64□□□□□ -0.07
NUP50-202ENST00000396096 TMEM42Q69YG0 159 aa14.64□□□□□ -0.07
NUP50-202ENST00000396096 ADAD2Q8NCV1 583 aaKnown RBP14.64□□□□□ -0.07
NUP50-202ENST00000396096 TMEM185AQ8NFB2 350 aa14.64□□□□□ -0.07
NUP50-202ENST00000396096 OR6K3Q8NGY3 331 aa14.64□□□□□ -0.07
NUP50-202ENST00000396096 ZNF845Q96IR2 970 aaPredicted RBP14.64□□□□□ -0.07
NUP50-202ENST00000396096 LINC00470Q9BZP3 86 aa14.64□□□□□ -0.07
NUP50-202ENST00000396096 MFFQ9GZY8 342 aa14.64□□□□□ -0.07
NUP50-202ENST00000396096 ABI3Q9P2A4 366 aa14.64□□□□□ -0.07
NUP50-202ENST00000396096 B4GALT7Q9UBV7 327 aa14.64□□□□□ -0.07
NUP50-202ENST00000396096 GPR132Q9UNW8 380 aa14.64□□□□□ -0.07
NUP50-202ENST00000396096 KMT2EQ8IZD2 1858 aa14.64□□□□□ -0.07
NUP50-202ENST00000396096 MYO7BQ6PIF6 2116 aa14.64□□□□□ -0.07
NUP50-202ENST00000396096 LOC100509620A0A075B734 347 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 OR5H14A6NHG9 310 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 DBX1A6NMT0 343 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 LIPCP11150 499 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 SERPINA2P20848 420 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 BLVRBP30043 206 aaPredicted RBP14.63□□□□□ -0.07
NUP50-202ENST00000396096 LHX2P50458 406 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 TAS2R46P59540 309 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 CNN3Q15417 329 aaKnown RBP14.63□□□□□ -0.07
NUP50-202ENST00000396096 DMRTC1Q5HYR2 192 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 NSUN5P2Q63ZY6 315 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 GSG1LQ6UXU4 331 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 PEG10Q86TG7 708 aaKnown RBP14.63□□□□□ -0.07
NUP50-202ENST00000396096 COMMD7Q86VX2 200 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 LHFPL1Q86WI0 220 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 OR5H2Q8NGV7 314 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 MARCH1Q8TCQ1 289 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 ABHD3Q8WU67 409 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 SIGLEC12Q96PQ1 595 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 GPR173Q9NS66 373 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 ZNF230Q9UIE0 474 aaPredicted RBP14.63□□□□□ -0.07
NUP50-202ENST00000396096 F10P00742 488 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 LCATP04180 440 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 MMP7P09237 267 aaPredicted RBP14.63□□□□□ -0.07
NUP50-202ENST00000396096 ZNF24P17028 368 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 AMY2BP19961 511 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 MPGP29372 298 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 HTR5AP47898 357 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 DCAF10Q5QP82 559 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 ASCL4Q6XD76 172 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 GALNTL5Q7Z4T8 443 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 OR10K1Q8NGX5 313 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 OR2AE1Q8NHA4 323 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 AKR7LQ8NHP1 331 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 SCARB1Q8WTV0 552 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 Q96M66 194 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 SCGB3A2Q96PL1 93 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 ATPIF1Q9UII2 106 aa14.63□□□□□ -0.07
NUP50-202ENST00000396096 A0A0D9SG52 128 aa14.62□□□□□ -0.07
NUP50-202ENST00000396096 FPR2P25090 351 aa14.62□□□□□ -0.07
NUP50-202ENST00000396096 CLDN18P56856 261 aa14.62□□□□□ -0.07
NUP50-202ENST00000396096 ZNF345Q14585 488 aa14.62□□□□□ -0.07
NUP50-202ENST00000396096 RSPO4Q2I0M5 234 aaPredicted RBP14.62□□□□□ -0.07
NUP50-202ENST00000396096 TMEM128Q5BJH2 165 aa14.62□□□□□ -0.07
NUP50-202ENST00000396096 RFPL4BQ6ZWI9 263 aa14.62□□□□□ -0.07
NUP50-202ENST00000396096 SKA3Q8IX90 412 aa14.62□□□□□ -0.07
NUP50-202ENST00000396096 FGFBP3Q8TAT2 258 aa14.62□□□□□ -0.07
NUP50-202ENST00000396096 IP6K3Q96PC2 410 aa14.62□□□□□ -0.07
NUP50-202ENST00000396096 CDC6Q99741 560 aa14.62□□□□□ -0.07
NUP50-202ENST00000396096 MED9Q9NWA0 146 aa14.62□□□□□ -0.07
NUP50-202ENST00000396096 OSGIN2Q9Y236 505 aa14.62□□□□□ -0.07
NUP50-202ENST00000396096 A0A0B4J2A0 478 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 AKR1C4P17516 323 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 AP2S1P53680 142 aaPredicted RBP14.61□□□□□ -0.07
NUP50-202ENST00000396096 MTCP1P56278 107 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 OR1C1Q15619 314 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 TOR2AQ5JU69 321 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 C11orf87Q6NUJ2 197 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 ZNF546Q86UE3 836 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 SLC51BQ86UW2 128 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 TMEM17Q86X19 198 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 CYYR1Q96J86 154 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 METTL9Q9H1A3 318 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 C5orf66Q9H5L9 145 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 COMMD9Q9P000 198 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 SHPKQ9UHJ6 478 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 TNFSF18Q9UNG2 199 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 RTTNQ86VV8 2226 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 hCG_38984A0A1B0GV85 526 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 FARS2O95363 451 aaKnown RBP14.61□□□□□ -0.07
NUP50-202ENST00000396096 PATE4P0C8F1 98 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 ZNF708P17019 499 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 SNU13P55769 128 aaKnown RBP14.61□□□□□ -0.07
NUP50-202ENST00000396096 AIMP2Q13155 320 aaKnown RBP14.61□□□□□ -0.07
NUP50-202ENST00000396096 PLXDC2Q6UX71 529 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 LHFPL2Q6ZUX7 228 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 KCNRGQ8N5I3 272 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 OR13G1Q8NGZ3 307 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 PDCD10Q9BUL8 212 aa14.61□□□□□ -0.07
NUP50-202ENST00000396096 NOSIPQ9Y314 301 aaKnown RBP14.61□□□□□ -0.07
NUP50-202ENST00000396096 FIGNL2A6NMB9 653 aa14.6□□□□□ -0.07
NUP50-202ENST00000396096 RPL36A-HNRNPH2H7BZ11 118 aa14.6□□□□□ -0.07
NUP50-202ENST00000396096 CCSO14618 274 aa14.6□□□□□ -0.07
NUP50-202ENST00000396096 SHOXO15266 292 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms