RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 TGM4P49221 684 aa16.71■□□□□ 0.27
SNCA-203ENST00000394986 GZMKP49863 264 aa16.71■□□□□ 0.27
SNCA-203ENST00000394986 MRPL28Q13084 256 aaKnown RBP16.71■□□□□ 0.27
SNCA-203ENST00000394986 CYB5R2Q6BCY4 276 aa16.71■□□□□ 0.27
SNCA-203ENST00000394986 LRRC28Q86X40 367 aaPredicted RBP16.71■□□□□ 0.27
SNCA-203ENST00000394986 EGFL6Q8IUX8 553 aa16.71■□□□□ 0.27
SNCA-203ENST00000394986 C1orf87Q8N0U7 546 aa16.71■□□□□ 0.27
SNCA-203ENST00000394986 OR52N1Q8NH53 320 aa16.71■□□□□ 0.27
SNCA-203ENST00000394986 NPRL2Q8WTW4 380 aa16.71■□□□□ 0.27
SNCA-203ENST00000394986 ITFG2Q969R8 447 aa16.71■□□□□ 0.27
SNCA-203ENST00000394986 ZNF184Q99676 751 aaPredicted RBP16.71■□□□□ 0.27
SNCA-203ENST00000394986 TLNRD1Q9H1K6 362 aa16.71■□□□□ 0.27
SNCA-203ENST00000394986 LPAR2Q9HBW0 351 aa16.71■□□□□ 0.27
SNCA-203ENST00000394986 ABCA2Q9BZC7 2435 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 IGHV2-5P01817 119 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 MDH2P40926 338 aaKnown RBP16.7■□□□□ 0.26
SNCA-203ENST00000394986 CDH15P55291 814 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 MED21Q13503 144 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 SFRP4Q6FHJ7 346 aaPredicted RBP16.7■□□□□ 0.26
SNCA-203ENST00000394986 WDR82Q6UXN9 313 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 GCSAMQ8N6F7 178 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 ZFP41Q8N8Y5 198 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 SCCPDHQ8NBX0 429 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 ZNF485Q8NCK3 441 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 DEFB108BQ8NET1 73 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 OR5AK2Q8NH90 309 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 LRRC29Q8WV35 223 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 ADAT3Q96EY9 351 aaPredicted RBP16.7■□□□□ 0.26
SNCA-203ENST00000394986 BABAM2Q9NXR7 383 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 ERVK-18Q9QC07 812 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 HHLA2Q9UM44 414 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 PPIAL4EA0A075B759 164 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 TRBV2A0A0J9YWF9 115 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 ANKRD61A6NGH8 418 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 TMEM210A6NLX4 147 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 TMEM212A6NML5 194 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 PPIAL4DF5H284 164 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 CDK1P06493 297 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 CCDC159P0C7I6 412 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 PPIAL4FP0DN26 164 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 GNG3P63215 75 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 CDK5R1Q15078 307 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 FAM76BQ5HYJ3 339 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 OR5A2Q8NGI9 324 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 TRMT10AQ8TBZ6 339 aaKnown RBP16.7■□□□□ 0.26
SNCA-203ENST00000394986 RGP1Q92546 391 aaPredicted RBP16.7■□□□□ 0.26
SNCA-203ENST00000394986 FGGYQ96C11 551 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 TMEM165Q9HC07 324 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 YAE1D1Q9NRH1 226 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 SCN3BQ9NY72 215 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 PPIAL4AQ9Y536 164 aa16.7■□□□□ 0.26
SNCA-203ENST00000394986 CEACAM18A8MTB9 384 aa16.69■□□□□ 0.26
SNCA-203ENST00000394986 MYL12BO14950 172 aa16.69■□□□□ 0.26
SNCA-203ENST00000394986 GMFBP60983 142 aa16.69■□□□□ 0.26
SNCA-203ENST00000394986 SLC35A2P78381 396 aa16.69■□□□□ 0.26
SNCA-203ENST00000394986 UBE2V2Q15819 145 aa16.69■□□□□ 0.26
SNCA-203ENST00000394986 TMEM155Q4W5P6 130 aa16.69■□□□□ 0.26
SNCA-203ENST00000394986 RPL22L1Q6P5R6 122 aaKnown RBP16.69■□□□□ 0.26
SNCA-203ENST00000394986 SPICQ8N5J4 248 aa16.69■□□□□ 0.26
SNCA-203ENST00000394986 CCDC54Q8NEL0 328 aa16.69■□□□□ 0.26
SNCA-203ENST00000394986 OR13C3Q8NGS6 347 aa16.69■□□□□ 0.26
SNCA-203ENST00000394986 SEH1LQ96EE3 360 aa16.69■□□□□ 0.26
SNCA-203ENST00000394986 C1orf159Q96HA4 380 aa16.69■□□□□ 0.26
SNCA-203ENST00000394986 TMEM246Q9BRR3 403 aa16.69■□□□□ 0.26
SNCA-203ENST00000394986 CHST5Q9GZS9 411 aa16.69■□□□□ 0.26
SNCA-203ENST00000394986 COMMD4Q9H0A8 199 aa16.69■□□□□ 0.26
SNCA-203ENST00000394986 OR51I2Q9H344 312 aa16.69■□□□□ 0.26
SNCA-203ENST00000394986 PCDHB10Q9UN67 800 aa16.69■□□□□ 0.26
SNCA-203ENST00000394986 ABCA1O95477 2261 aa16.68■□□□□ 0.26
SNCA-203ENST00000394986 IGHV3OR15-7A0A075B7D8 119 aa16.68■□□□□ 0.26
SNCA-203ENST00000394986 OR5B21A6NL26 309 aa16.68■□□□□ 0.26
SNCA-203ENST00000394986 RHBDL1O75783 438 aa16.68■□□□□ 0.26
SNCA-203ENST00000394986 TGFAP01135 160 aa16.68■□□□□ 0.26
SNCA-203ENST00000394986 ZNF12P17014 697 aa16.68■□□□□ 0.26
SNCA-203ENST00000394986 ZNF20P17024 532 aa16.68■□□□□ 0.26
SNCA-203ENST00000394986 SEC61A1P61619 476 aaKnown RBP16.68■□□□□ 0.26
SNCA-203ENST00000394986 ZNF404Q494X3 552 aa16.68■□□□□ 0.26
SNCA-203ENST00000394986 CCDC58Q4VC31 144 aa16.68■□□□□ 0.26
SNCA-203ENST00000394986 HAGHLQ6PII5 290 aaPredicted RBP16.68■□□□□ 0.26
SNCA-203ENST00000394986 MUC20Q8N307 709 aaPredicted RBP16.68■□□□□ 0.26
SNCA-203ENST00000394986 NANOGP1Q8N7R0 232 aa16.68■□□□□ 0.26
SNCA-203ENST00000394986 LINC01356Q8N9X3 169 aa16.68■□□□□ 0.26
SNCA-203ENST00000394986 RPS4Y2Q8TD47 263 aa16.68■□□□□ 0.26
SNCA-203ENST00000394986 HAVCR2Q8TDQ0 301 aa16.68■□□□□ 0.26
SNCA-203ENST00000394986 MYDGFQ969H8 173 aa16.68■□□□□ 0.26
SNCA-203ENST00000394986 RAB39BQ96DA2 213 aa16.68■□□□□ 0.26
SNCA-203ENST00000394986 TRIM36Q9NQ86 728 aa16.68■□□□□ 0.26
SNCA-203ENST00000394986 TPRKBQ9Y3C4 175 aa16.68■□□□□ 0.26
SNCA-203ENST00000394986 PNMA8CA0A1B0GUJ8 204 aa16.67■□□□□ 0.26
SNCA-203ENST00000394986 FAM230AA0A1W2PPH8 454 aa16.67■□□□□ 0.26
SNCA-203ENST00000394986 PQLC2LA1A4F0 135 aa16.67■□□□□ 0.26
SNCA-203ENST00000394986 INAFM1C9JVW0 142 aa16.67■□□□□ 0.26
SNCA-203ENST00000394986 LGALS8O00214 317 aa16.67■□□□□ 0.26
SNCA-203ENST00000394986 LHBP01229 141 aa16.67■□□□□ 0.26
SNCA-203ENST00000394986 CRHBPP24387 322 aa16.67■□□□□ 0.26
SNCA-203ENST00000394986 TSEN15Q8WW01 171 aaKnown RBP16.67■□□□□ 0.26
SNCA-203ENST00000394986 PATZ1Q9HBE1 687 aaKnown RBP16.67■□□□□ 0.26
SNCA-203ENST00000394986 NSD1Q96L73 2696 aaPredicted RBP16.67■□□□□ 0.26
SNCA-203ENST00000394986 ANK3Q12955 4377 aaKnown RBP16.66■□□□□ 0.26
SNCA-203ENST00000394986 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms