RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 FOXI3A8MTJ6 420 aaPredicted RBP16.13■□□□□ 0.17
PCDHA1-202ENST00000394633 RAMP1O60894 148 aa16.13■□□□□ 0.17
PCDHA1-202ENST00000394633 CSNK2A1P68400 391 aaPredicted RBP16.13■□□□□ 0.17
PCDHA1-202ENST00000394633 ZNF283Q8N7M2 679 aa16.13■□□□□ 0.17
PCDHA1-202ENST00000394633 ADPRHL1Q8NDY3 354 aa16.13■□□□□ 0.17
PCDHA1-202ENST00000394633 CSNK2A3Q8NEV1 391 aa16.13■□□□□ 0.17
PCDHA1-202ENST00000394633 OR5D18Q8NGL1 313 aa16.13■□□□□ 0.17
PCDHA1-202ENST00000394633 RHBDD1Q8TEB9 315 aa16.13■□□□□ 0.17
PCDHA1-202ENST00000394633 SMIM8Q96KF7 97 aa16.13■□□□□ 0.17
PCDHA1-202ENST00000394633 NRIP2Q9BQI9 281 aa16.13■□□□□ 0.17
PCDHA1-202ENST00000394633 EHFQ9NZC4 300 aa16.13■□□□□ 0.17
PCDHA1-202ENST00000394633 DNAJB11Q9UBS4 358 aa16.13■□□□□ 0.17
PCDHA1-202ENST00000394633 EML6Q6ZMW3 1958 aa16.12■□□□□ 0.17
PCDHA1-202ENST00000394633 HEXBP07686 556 aa16.12■□□□□ 0.17
PCDHA1-202ENST00000394633 MUC1P15941 1255 aaPredicted RBP16.12■□□□□ 0.17
PCDHA1-202ENST00000394633 RHOFQ9HBH0 211 aa16.12■□□□□ 0.17
PCDHA1-202ENST00000394633 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.12■□□□□ 0.17
PCDHA1-202ENST00000394633 PMS2P1A4D2B8 440 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 HPNP05981 417 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 HOXB5P09067 269 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 QDPRP09417 244 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 KLK2P20151 261 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 MSX1P28360 303 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 RFC3P40938 356 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 HOXA1P49639 335 aaPredicted RBP16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 FAM189A2Q15884 450 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 KCNMB1Q16558 191 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 ZNF528Q3MIS6 628 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 SLC23A3Q6PIS1 610 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 SLC38A9Q8NBW4 561 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 OR6X1Q8NH79 312 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 SAT2Q96F10 170 aaPredicted RBP16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 LIN37Q96GY3 246 aaPredicted RBP16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 LYZL4Q96KX0 146 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 OR5B2Q96R09 309 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 ZNF768Q9H5H4 540 aaKnown RBP16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 GSKIPQ9P0R6 139 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 R4GN57 208 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 IGLV3-12A0A075B6K2 115 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 LRP3O75074 770 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 RPL35P42766 123 aaKnown RBP16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 RAB13P51153 203 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 TAS2R46P59540 309 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 S100A10P60903 97 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 KISS1Q15726 138 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 RPL7L1Q6DKI1 246 aaKnown RBP16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 RHBDD2Q6NTF9 364 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 OR10G3Q8NGC4 313 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 NPRL2Q8WTW4 380 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 WDR77Q9BQA1 342 aaPredicted RBP16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 DUSP23Q9BVJ7 150 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 PECRQ9BY49 303 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 SLC7A5P2Q9GIP4 190 aa16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 RCC2Q9P258 522 aaKnown RBP16.11■□□□□ 0.17
PCDHA1-202ENST00000394633 PRF1P14222 555 aa16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 RCC1P18754 421 aaPredicted RBP16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 PTGER4P35408 488 aa16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 LPAR6P43657 344 aa16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 CAV2P51636 162 aa16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 HIST3H3Q16695 136 aa16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 KMT5CQ86Y97 462 aa16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 CPNE2Q96FN4 548 aaPredicted RBP16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 ARRDC1-AS1Q9H2J1 176 aa16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 ZFP57Q9NU63 452 aa16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 WIF1Q9Y5W5 379 aa16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 MED12Q93074 2177 aa16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 IGLV3-32A0A0A0MS00 114 aa16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 ZNF98A6NK75 572 aa16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 FIGNL2A6NMB9 653 aa16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 FARS2O95363 451 aaKnown RBP16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 PET100P0DJ07 73 aa16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 NFYBP25208 207 aa16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 BLVRBP30043 206 aaPredicted RBP16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 PTGFRP43088 359 aa16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 AKR1D1P51857 326 aa16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 FAM69BQ5VUD6 431 aa16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 NSUN5P2Q63ZY6 315 aa16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 EMG1Q92979 244 aaKnown RBP16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 OXGR1Q96P68 337 aa16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 METTL7AQ9H8H3 244 aa16.1■□□□□ 0.17
PCDHA1-202ENST00000394633 DMXL1Q9Y485 3027 aa16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 A0A1W2PQM1 296 aa16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 SFTPBP07988 381 aa16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 HKR1P10072 659 aa16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 MPLP40238 635 aa16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 GRB2P62993 217 aaKnown RBP16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 ZNF574Q6ZN55 896 aaPredicted RBP16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 DTX1Q86Y01 620 aa16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 FOXRED2Q8IWF2 684 aa16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 PNLDC1Q8NA58 520 aaKnown RBP16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 OR2M3Q8NG83 312 aa16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 ESRP2Q9H6T0 727 aaKnown RBP16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 FREM2Q5SZK8 3169 aa16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 IGLV3-1P01715 115 aa16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 NAT2P11245 290 aa16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 ZNF708P17019 499 aa16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 ZNF43P17038 809 aa16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 SERPINA2P20848 420 aa16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 NME2P22392 152 aa16.09■□□□□ 0.17
PCDHA1-202ENST00000394633 SFTPDP35247 375 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms