RNA–Protein interactions for RNA: ENST00000393438.6

RUFY1-202, Transcript of RUN and FYVE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUFY1, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY1-202ENST00000393438 KIR3DL1P43629 444 aa12.36□□□□□ -0.43
RUFY1-202ENST00000393438 MFAP4P55083 255 aa12.36□□□□□ -0.43
RUFY1-202ENST00000393438 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.36□□□□□ -0.43
RUFY1-202ENST00000393438 CPZQ66K79 652 aa12.36□□□□□ -0.43
RUFY1-202ENST00000393438 RNF125Q96EQ8 232 aa12.36□□□□□ -0.43
RUFY1-202ENST00000393438 C20orf24Q9BUV8 137 aa12.36□□□□□ -0.43
RUFY1-202ENST00000393438 GTSF1LQ9H1H1 148 aa12.36□□□□□ -0.43
RUFY1-202ENST00000393438 ZNF107Q9UII5 783 aaPredicted RBP12.36□□□□□ -0.43
RUFY1-202ENST00000393438 SERTAD3Q9UJW9 196 aa12.36□□□□□ -0.43
RUFY1-202ENST00000393438 LSM2Q9Y333 95 aaKnown RBP12.36□□□□□ -0.43
RUFY1-202ENST00000393438 WDR45Q9Y484 360 aa12.36□□□□□ -0.43
RUFY1-202ENST00000393438 C9JQL5 133 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 LRP3O75074 770 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 CLDN7O95471 211 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 OR5H8P0DN80 308 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 ELK1P19419 428 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 H2BFSP57053 126 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 SGCBQ16585 318 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 TMEM183BQ1AE95 376 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 SLC25A26Q70HW3 274 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 ATG5Q9H1Y0 275 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 NUDT4Q9NZJ9 180 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 B3GALT1Q9Y5Z6 326 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 HS3ST3B1Q9Y662 390 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 ZNF106Q9H2Y7 1883 aaKnown RBP12.35□□□□□ -0.43
RUFY1-202ENST00000393438 HSD17B6O14756 317 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 NME6O75414 186 aaPredicted RBP12.35□□□□□ -0.43
RUFY1-202ENST00000393438 TMEM225BP0DP42 221 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 PSMB1P20618 241 aaKnown RBP12.35□□□□□ -0.43
RUFY1-202ENST00000393438 OPRD1P41143 372 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 PIGPP57054 158 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 PAFAH1B2P68402 229 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 BTN3A2P78410 334 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 H3F3AP84243 136 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 RUNX3Q13761 415 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 ELOBQ15370 118 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 PARM1Q6UWI2 310 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 UNC80Q8N2C7 3258 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 FER1L6-AS1Q8NA97 138 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 FGF14Q92915 247 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 POP5Q969H6 163 aaKnown RBP12.35□□□□□ -0.43
RUFY1-202ENST00000393438 TRIM36Q9NQ86 728 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 MMP17Q9ULZ9 603 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 OR51B2Q9Y5P1 312 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 SPTBN5Q9NRC6 3674 aaKnown RBP12.35□□□□□ -0.43
RUFY1-202ENST00000393438 EYSQ5T1H1 3165 aa12.35□□□□□ -0.43
RUFY1-202ENST00000393438 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.34□□□□□ -0.43
RUFY1-202ENST00000393438 RNF222A6NCQ9 220 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 TNFRSF13BO14836 293 aaPredicted RBP12.34□□□□□ -0.43
RUFY1-202ENST00000393438 FCGR3AP08637 254 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 CXCL1P09341 107 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 MLLT11Q13015 90 aaPredicted RBP12.34□□□□□ -0.43
RUFY1-202ENST00000393438 SPHARQ15513 63 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 SLC26A10Q8NG04 563 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 Q8WTZ3 238 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 PIGTQ969N2 578 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 TMEM106AQ96A25 262 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 RERGQ96A58 199 aaPredicted RBP12.34□□□□□ -0.43
RUFY1-202ENST00000393438 RGMAQ96B86 450 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 RPP25Q9BUL9 199 aaKnown RBP12.34□□□□□ -0.43
RUFY1-202ENST00000393438 BET1LQ9NYM9 111 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 NAT8Q9UHE5 227 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 CHD3Q12873 2000 aaKnown RBP12.34□□□□□ -0.43
RUFY1-202ENST00000393438 COL4A3Q01955 1670 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 HCRTR1O43613 425 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 DUX1O43812 170 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 AREGP15514 252 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 GPR6P46095 362 aaPredicted RBP12.34□□□□□ -0.43
RUFY1-202ENST00000393438 AIMP2Q13155 320 aaKnown RBP12.34□□□□□ -0.43
RUFY1-202ENST00000393438 CDKN3Q16667 212 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 TTLL9Q3SXZ7 439 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 ZNF585BQ52M93 769 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 PRAMEF17Q5VTA0 474 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 PLAG1Q6DJT9 500 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 SFTPA1Q8IWL2 248 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 LGI4Q8N135 537 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 B3GNT7Q8NFL0 401 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 THAP4Q8WY91 577 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 DUX5Q96PT3 197 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 TRIB1Q96RU8 372 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 LPAR3Q9UBY5 353 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 CRLS1Q9UJA2 301 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 HHLA2Q9UM44 414 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 MYO10Q9HD67 2058 aa12.34□□□□□ -0.43
RUFY1-202ENST00000393438 TICRRQ7Z2Z1 1910 aa12.33□□□□□ -0.43
RUFY1-202ENST00000393438 UNC119BA6NIH7 251 aa12.33□□□□□ -0.44
RUFY1-202ENST00000393438 MT-ND4P03905 459 aa12.33□□□□□ -0.44
RUFY1-202ENST00000393438 CHRM2P08172 466 aa12.33□□□□□ -0.44
RUFY1-202ENST00000393438 UCP2P55851 309 aa12.33□□□□□ -0.44
RUFY1-202ENST00000393438 RPL38P63173 70 aaKnown RBP12.33□□□□□ -0.44
RUFY1-202ENST00000393438 KIAA0040Q15053 153 aa12.33□□□□□ -0.44
RUFY1-202ENST00000393438 ZNF658BQ4V348 819 aaPredicted RBP12.33□□□□□ -0.44
RUFY1-202ENST00000393438 ACSM3Q53FZ2 586 aa12.33□□□□□ -0.44
RUFY1-202ENST00000393438 SBSNQ6UWP8 590 aa12.33□□□□□ -0.44
RUFY1-202ENST00000393438 Q6ZVH6 145 aa12.33□□□□□ -0.44
RUFY1-202ENST00000393438 H1FNTQ75WM6 255 aaPredicted RBP12.33□□□□□ -0.44
RUFY1-202ENST00000393438 GPR135Q8IZ08 494 aa12.33□□□□□ -0.44
RUFY1-202ENST00000393438 LGI3Q8N145 548 aa12.33□□□□□ -0.44
RUFY1-202ENST00000393438 SLC16A11Q8NCK7 471 aa12.33□□□□□ -0.44
RUFY1-202ENST00000393438 SECTM1Q8WVN6 248 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms