RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 HINT1P49773 126 aaPredicted RBP13.34□□□□□ -0.27
CCDC50-201ENST00000392455 FAM131CQ96AQ9 280 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 PACRGQ96M98 296 aaPredicted RBP13.34□□□□□ -0.27
CCDC50-201ENST00000392455 CSNK1G1Q9HCP0 422 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 Q9N2K0 584 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 C4AP0C0L4 1744 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 TBX19O60806 448 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 SFTA3P0C7M3 94 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 SCAND1P57086 179 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 ZNF260Q3ZCT1 412 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 PELI3Q8N2H9 469 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 DTD1Q8TEA8 209 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 OR5V1Q9UGF6 321 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 CTNSO60931 367 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 ACKR1Q16570 336 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 ANKRD55Q3KP44 614 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 CLEC14AQ86T13 490 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 ZC3HAV1LQ96H79 300 aaKnown RBP13.34□□□□□ -0.27
CCDC50-201ENST00000392455 GPR78Q96P69 363 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 C1QTNF3Q9BXJ4 246 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 TMEM9BQ9NQ34 198 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 PDLIM7Q9NR12 457 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 SPTA1P02549 2419 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 IVDP26440 423 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 MYPOPQ86VE0 399 aaPredicted RBP13.34□□□□□ -0.27
CCDC50-201ENST00000392455 TMPRSS13Q9BYE2 586 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 SPNS1Q9H2V7 528 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 CES1P1Q9UKY3 287 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 OOEPA6NGQ2 149 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 CTF1Q16619 201 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 TMEM64Q6YI46 380 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 IL21Q9HBE4 155 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 SIRT7Q9NRC8 400 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 HDGFL3Q9Y3E1 203 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 ANKRD36A6QL64 1941 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 CYR61O00622 381 aa13.33□□□□□ -0.27
CCDC50-201ENST00000392455 UBE2L6O14933 153 aa13.33□□□□□ -0.27
CCDC50-201ENST00000392455 LEXMQ3ZCV2 418 aa13.33□□□□□ -0.27
CCDC50-201ENST00000392455 FAM71E1Q6IPT2 247 aa13.33□□□□□ -0.27
CCDC50-201ENST00000392455 SYS1Q8N2H4 156 aa13.33□□□□□ -0.27
CCDC50-201ENST00000392455 CLDN23Q96B33 292 aa13.33□□□□□ -0.27
CCDC50-201ENST00000392455 C12orf49Q9H741 205 aa13.33□□□□□ -0.27
CCDC50-201ENST00000392455 PCMT1P22061 227 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 OR10J1P30954 320 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 DUSP5Q16690 384 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 LDLRAD1Q5T700 205 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 ADAMTSL4Q6UY14 1074 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 TMEM251Q8N6I4 163 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 DNAJC25-GNG10A0A024R161 153 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 A0A087X0M5 115 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 A0A1B0GX30 115 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 MFNGO00587 321 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 ZNF385BQ569K4 471 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 TAF1P21675 1872 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 PPP6CO00743 305 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 GP1BAP07359 652 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 CST9Q5W186 159 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 HCSTQ9UBK5 93 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 NAT8Q9UHE5 227 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 SHC1P29353 583 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 PKIAP61925 76 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 SLC16A12Q6ZSM3 486 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 FBXL14Q8N1E6 418 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 SYT8Q8NBV8 401 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 ZNF738Q8NE65 137 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 OR5M1Q8NGP8 315 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 LRRC3BQ96PB8 259 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 KIAA2026Q5HYC2 2103 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 SLC6A1P30531 599 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 DLK1P80370 383 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 RPS4Y2Q8TD47 263 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 UBTD2Q8WUN7 234 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 CADP27708 2225 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 TBPL2Q6SJ96 375 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 ZNF383Q8NA42 475 aa13.33□□□□□ -0.28
CCDC50-201ENST00000392455 TRAV1-2A0A0B4J238 106 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 PTRH1Q86Y79 214 aaKnown RBP13.32□□□□□ -0.28
CCDC50-201ENST00000392455 APOBEC3DQ96AK3 386 aaPredicted RBP13.32□□□□□ -0.28
CCDC50-201ENST00000392455 FAM210BQ96KR6 192 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 S1PR5Q9H228 398 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 HCFC2Q9Y5Z7 792 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 R4GMQ9 66 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 TMEM189-UBE2V1I3L0A0 370 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 NDUFB3O43676 98 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 FAHP16930 419 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 HRH1P35367 487 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 KIAA1958Q8N8K9 716 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 NUP37Q8NFH4 326 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 ZNF764Q96H86 408 aaPredicted RBP13.32□□□□□ -0.28
CCDC50-201ENST00000392455 AP4M1O00189 453 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 RHBDL1O75783 438 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 CLDN20P56880 219 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 OSR2Q8N2R0 312 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 ACY3Q96HD9 319 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 LOC107986453A0A1B0GWG9 222 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 GUSBP08236 651 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 FURINP09958 794 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 PTGFRP43088 359 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 ZNF680Q8NEM1 530 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 DIRC2Q96SL1 478 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms